| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15942 | 5:14,806,407-14,808,137 | + | C2H5g14904 | CX5g038438 | LOC_Os05g31420 | Os05g0378500 | Gnd5 | Detail |
| C1H5g26766 | 5:14,841,025-14,841,713 | - | C2H5g05514 | CX5g037505 | LOC_Os05g31470 | - | - | Detail |
| C1H5g21416 | 5:14,847,264-14,852,436 | - | C2H5g07919 | CX5g040361 | LOC_Os05g31480 | Os05g0378800 | - | Detail |
| C1H5g03148 | 5:14,853,191-14,857,977 | - | C2H5g27417 | CX5g038969 | LOC_Os05g31490 | Os05g0378900 | - | Detail |
| C1H5g12936 | 5:14,863,567-14,866,978 | - | - | - | LOC_Os05g31520 | - | - | Detail |
| C1H5g20720 | 5:14,867,847-14,869,818 | - | C2H5g25052 | - | - | - | - | Detail |
| C1H5g28359 | 5:14,872,112-14,881,346 | + | C2H5g19061 | CX5g039321 | LOC_Os05g31530 | Os05g0379500 | - | Detail |
| C1H5g13126 | 5:14,882,877-14,883,458 | - | - | - | - | - | - | Detail |
| C1H5g09848 | 5:14,883,520-14,884,320 | - | - | - | - | - | - | Detail |
| C1H5g28629 | 5:14,884,371-14,884,991 | - | - | - | - | - | - | Detail |
| C1H5g31239 | 5:14,885,493-14,887,155 | - | - | - | - | Os05g0380850 | - | Detail |
| C1H5g05054 | 5:14,891,582-14,892,178 | - | C2H5g18251 | CX5g037649 | LOC_Os05g31620 | Os05g0380900 | - | Detail |
| C1H5g03678 | 5:14,909,056-14,909,574 | - | C2H5g02851 | CX5g036933 | LOC_Os05g31670 | Os05g0381400 | AWPM-19, PM19, OsPM1, OsPM19L1 | Detail |
| C1H5g22192 | 5:14,912,709-14,916,753 | + | C2H5g00812 | CX5g040874 | LOC_Os05g31680 | Os05g0381500 | - | Detail |
| C1H5g26855 | 5:14,928,977-14,932,252 | + | - | CX5g041023 | LOC_Os05g31690 | Os05g0381700 | - | Detail |
| C1H5g18693 | 5:14,960,958-14,963,095 | + | C2H5g07422 | CX5g038575 | LOC_Os05g31710 | Os05g0381900 | - | Detail |
| C1H5g25084 | 5:14,975,576-14,978,892 | + | C2H5g04833 | CX5g040022 | LOC_Os05g31720 | Os05g0382000 | - | Detail |
| C1H5g14307 | 5:14,983,196-14,987,606 | - | C2H5g08328 | CX5g037534 | LOC_Os05g31730 | Os05g0382200 | - | Detail |
| C1H5g04280 | 5:14,993,709-14,995,280 | + | C2H5g19880 | CX5g036798 | LOC_Os05g31740 | Os05g0382500 | CYP94E3, OsCYP94E3 | Detail |
| C1H5g01406 | 5:15,003,520-15,005,185 | - | C2H5g19685 | CX5g040387 | LOC_Os05g31750 | Os05g0382600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g012184 | 11:2,741,379-2,741,886 | - | C1H11g03383 | C2H11g18294 | LOC_Os11g06720 | Os11g0167800 | OsASR5 | Detail |
| CX11g012070 | 11:2,748,825-2,748,986 | - | C1H11g13472 | C2H11g00852 | LOC_Os12g37360 | Os01g0254000 | OsSar1c | Detail |
| CX11g012984 | 11:2,750,025-2,751,362 | - | C1H11g13472 | C2H11g00852 | - | - | - | Detail |
| CX11g013343 | 11:2,758,218-2,758,655 | - | C1H11g06945 | - | LOC_Os11g06730 | Os11g0168000 | FEB2 | Detail |
| CX11g011858 | 11:2,760,527-2,762,844 | + | C1H11g08843 | C2H11g11073 | LOC_Os11g06740 | Os11g0168100 | - | Detail |
| CX11g011919 | 11:2,763,991-2,764,605 | - | - | - | - | - | - | Detail |
| CX11g011071 | 11:2,765,339-2,767,758 | + | C1H11g06515 | C2H11g24776 | LOC_Os11g06750 | Os11g0168200 | - | Detail |
| CX11g011238 | 11:2,770,254-2,773,651 | + | C1H11g16125 | C2H11g13900 | LOC_Os11g06760 | Os11g0168300 | - | Detail |
| CX11g013004 | 11:2,775,463-2,777,822 | - | C1H11g29845 | C2H11g12941 | LOC_Os11g06770 | Os11g0168500 | - | Detail |
| CX11g012040 | 11:2,799,093-2,804,544 | + | C1H11g25541 | C2H11g06867 | LOC_Os11g06810 | Os11g0169100 | - | Detail |
| CX11g012381 | 11:2,809,326-2,810,858 | - | C1H11g31699 | C2H11g18204 | LOC_Os11g06820 | Os11g0169200 | OsAUX5 | Detail |
| CX11g011604 | 11:2,832,136-2,833,422 | - | C1H11g23066 | C2H11g17775 | LOC_Os11g06860 | Os11g0169600 | - | Detail |
| CX11g014813 | 11:2,833,689-2,835,413 | - | C1H11g21063 | C2H11g15019 | LOC_Os11g06870 | Os11g0169700 | - | Detail |
| CX11g011307 | 11:2,838,414-2,842,845 | + | C1H11g28306 | C2H11g25500 | LOC_Os11g06880 | Os11g0169800 | - | Detail |
| CX11g012521 | 11:2,843,690-2,845,420 | - | C1H11g24754 | C2H11g21238 | LOC_Os11g06890 | Os11g0169900 | - | Detail |
| CX11g012739 | 11:2,848,816-2,855,165 | - | C1H11g03754 | C2H11g01682 | LOC_Os11g06900 | Os11g0170000 | - | Detail |
| CX11g013642 | 11:2,855,843-2,861,775 | - | C1H11g03754 | C2H11g01682 | LOC_Os11g06910 | Os11g0170200 | - | Detail |
| CX11g012261 | 11:2,872,225-2,877,222 | - | C1H11g19710 | C2H11g02083 | LOC_Os11g06930 | Os11g0170300 | - | Detail |
| CX11g014717 | 11:2,881,723-2,884,275 | - | C1H11g00486 | C2H11g14668 | LOC_Os11g06990 | Os11g0171100 | - | Detail |
| CX11g010973 | 11:2,905,695-2,908,532 | + | C1H11g02887 | C2H11g20177 | LOC_Os11g07000 | Os11g0171100 | - | Detail |