| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g29666 | 4:20,066,309-20,067,316 | - | C1H4g19360 | CX4g035580 | LOC_Os04g39100 | Os04g0465100 | - | Detail |
| C2H4g09735 | 4:20,069,573-20,069,974 | - | - | CX4g036591 | - | - | - | Detail |
| C2H4g19933 | 4:20,080,102-20,080,645 | - | C1H4g22908 | CX4g036602 | LOC_Os04g39110 | Os04g0465300 | GASR2, OsGASR2 | Detail |
| C2H4g08157 | 4:20,087,000-20,089,489 | + | C1H4g23208 | CX4g032042 | LOC_Os04g39130 | Os04g0465432 | - | Detail |
| C2H4g13916 | 4:20,089,946-20,091,567 | - | C1H4g20155 | CX4g034470 | LOC_Os04g39140 | Os04g0465500 | - | Detail |
| C2H4g18235 | 4:20,093,110-20,093,788 | + | C1H4g19202 | CX4g035849 | LOC_Os04g39150 | Os04g0465600 | OsMLP423 | Detail |
| C2H4g13664 | 4:20,095,186-20,100,592 | + | C1H4g22593 | CX4g033981 | LOC_Os04g39160 | Os04g0465700 | OsRDR2, FEM1 | Detail |
| C2H4g05826 | 4:20,101,887-20,103,660 | + | C1H4g27473 | CX4g033685 | LOC_Os04g39170 | Os04g0465800 | - | Detail |
| C2H4g07790 | 4:20,104,317-20,105,895 | - | C1H4g15375 | CX4g033509 | LOC_Os04g39180 | Os04g0465900 | OsARK2 | Detail |
| C2H4g18940 | 4:20,112,023-20,112,259 | + | - | CX4g032468 | - | Os04g0466000 | - | Detail |
| C2H4g05821 | 4:20,119,194-20,122,279 | - | C1H4g10317 | CX4g036412 | LOC_Os04g39190 | Os04g0466100 | - | Detail |
| C2H4g04162 | 4:20,136,707-20,139,911 | + | C1H4g15967 | CX4g035488 | LOC_Os04g39210 | Os04g0466600 | - | Detail |
| C2H4g02293 | 4:20,140,356-20,149,248 | - | C1H4g23954 | CX4g033308 | LOC_Os04g39220 | Os04g0466700 | - | Detail |
| C2H4g08624 | 4:20,151,899-20,152,454 | + | C1H4g26968 | CX4g033180 | LOC_Os04g39230 | Os04g0467000 | - | Detail |
| C2H4g13693 | 4:20,152,936-20,158,756 | - | C1H4g20963 | CX4g031432 | LOC_Os04g39240 | Os04g0467100 | - | Detail |
| C2H4g06059 | 4:20,174,411-20,177,455 | - | - | CX4g035463 | LOC_Os04g39250 | Os04g0467300 | - | Detail |
| C2H4g09111 | 4:20,178,400-20,183,180 | - | C1H4g31113 | CX4g033763 | LOC_Os04g39260 | Os04g0467400 | - | Detail |
| C2H4g05588 | 4:20,183,652-20,186,902 | - | C1H4g30490 | CX4g035308 | LOC_Os04g39270 | Os04g0467700 | - | Detail |
| C2H4g22782 | 4:20,188,417-20,192,849 | - | C1H4g19832 | CX4g032151 | LOC_Os04g39280 | Os04g0467800 | - | Detail |
| C2H4g10668 | 4:20,193,107-20,199,849 | - | C1H4g15083 | CX4g035147 | LOC_Os04g53760 | Os04g0467901 | OsKCH2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000327 | 1:5,482,337-5,482,537 | - | - | - | - | - | - | Detail |
| CX1g003432 | 1:5,485,119-5,485,646 | + | - | C2H3g25696 | - | - | - | Detail |
| CX1g003866 | 1:5,496,797-5,498,872 | - | C1H1g17492 | C2H1g17634 | LOC_Os01g11570 | Os01g0214200 | - | Detail |
| CX1g004005 | 1:5,501,066-5,503,049 | + | C1H1g05723 | C2H1g27065 | LOC_Os01g11580 | Os01g0214300 | - | Detail |
| CX1g001697 | 1:5,507,828-5,509,761 | + | C1H1g20464 | C2H1g13662 | LOC_Os01g11590 | Os01g0214400 | - | Detail |
| CX1g002606 | 1:5,511,938-5,512,284 | + | C1H1g07596 | C2H1g29223 | LOC_Os01g11600 | Os01g0214500 | - | Detail |
| CX1g006288 | 1:5,555,835-5,556,209 | - | - | - | LOC_Os11g47039 | Os11g0692400 | - | Detail |
| CX1g001084 | 1:5,582,461-5,582,727 | + | - | - | - | - | - | Detail |
| CX1g002873 | 1:5,625,623-5,628,949 | - | C1H1g11369 | C2H1g01657 | LOC_Os01g11810 | Os01g0217000 | - | Detail |
| CX1g001632 | 1:5,632,459-5,633,585 | - | C1H1g25421 | C2H1g27711 | LOC_Os01g11830 | Os01g0330200 | - | Detail |
| CX1g005713 | 1:5,637,414-5,638,594 | + | C1H1g15985 | C2H1g08464 | LOC_Os01g11840 | Os01g0330200 | - | Detail |
| CX1g000279 | 1:5,639,601-5,642,048 | - | C1H1g06189 | C2H1g05180 | LOC_Os01g11850 | Os01g0217400 | - | Detail |
| CX1g005966 | 1:5,644,764-5,644,916 | + | C1H4g20138 | - | - | - | - | Detail |
| CX1g005289 | 1:5,645,835-5,651,902 | + | C1H1g09690 | C2H1g00290 | LOC_Os01g11860 | Os01g0217500 | - | Detail |
| CX1g006272 | 1:5,654,742-5,657,474 | + | C1H1g24673 | C2H1g04999 | LOC_Os01g11880 | Os01g0217800 | - | Detail |
| CX1g006867 | 1:5,665,995-5,677,254 | + | C1H1g21326 | C2H1g26585 | LOC_Os01g11900 | Os01g0218032 | ROS1A, ROS1a, OsROS1, TA2 | Detail |
| CX1g003932 | 1:5,686,225-5,687,188 | + | C1H1g12724 | C2H1g12652 | LOC_Os01g11910 | Os01g0218100 | - | Detail |
| CX1g004539 | 1:5,697,254-5,701,492 | + | C1H1g09961 | C2H1g17909 | LOC_Os01g11920 | Os01g0218200 | - | Detail |
| CX1g000608 | 1:5,713,663-5,718,794 | + | C1H1g30290 | C2H1g10690 | LOC_Os01g11940 | Os01g0218500 | - | Detail |
| CX1g003540 | 1:5,720,493-5,726,625 | - | C1H1g21863 | C2H1g22932 | LOC_Os01g11946 | Os01g0218700 | - | Detail |