| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g08691 | 3:3,095,114-3,096,195 | - | C1H3g01458 | CX3g027399 | LOC_Os03g07010 | Os03g0735900 | OsRAM2 | Detail |
| C2H3g15876 | 3:3,097,825-3,098,514 | - | C1H3g01458 | CX3g027399 | LOC_Os03g07060 | Os03g0166600 | - | Detail |
| C2H3g12538 | 3:3,105,582-3,111,263 | + | C1H3g04033 | CX3g030094 | LOC_Os03g07080 | Os03g0166800 | - | Detail |
| C2H3g19555 | 3:3,113,798-3,115,328 | + | C1H3g18965 | CX3g030196 | LOC_Os03g07100 | Os03g0167000 | - | Detail |
| C2H3g13511 | 3:3,116,565-3,117,357 | + | C1H3g18624 | CX10g008216 | LOC_Os10g27174 | Os10g0411700 | - | Detail |
| C2H3g27991 | 3:3,117,507-3,121,829 | - | C1H3g05997 | CX3g025455 | LOC_Os03g07110 | Os03g0167200 | OsIQM2 | Detail |
| C2H3g02351 | 3:3,124,852-3,128,753 | + | C1H3g25407 | CX3g027989 | LOC_Os03g07120 | Os03g0167400 | - | Detail |
| C2H3g10661 | 3:3,133,286-3,138,036 | + | C1H3g07433 | CX3g026239 | LOC_Os03g07130 | Os03g0167500 | OsRMR3, OsRMR1, RMR1 | Detail |
| C2H3g14503 | 3:3,140,502-3,142,873 | + | C1H3g28690 | CX3g025251 | LOC_Os03g07140 | Os03g0167600 | DPW | Detail |
| C2H3g28808 | 3:3,143,155-3,143,415 | + | C1H3g28690 | CX3g025251 | LOC_Os03g07140 | Os03g0167600 | DPW | Detail |
| C2H3g20508 | 3:3,143,733-3,148,329 | - | C1H3g18783 | CX3g030776 | LOC_Os03g07150 | Os03g0167700 | OsPP2A-5 | Detail |
| C2H3g28397 | 3:3,150,226-3,155,148 | + | C1H3g01595 | CX3g026055 | LOC_Os03g07160 | Os03g0167800 | - | Detail |
| C2H3g21676 | 3:3,160,484-3,163,307 | + | C1H3g17186 | CX3g029636 | LOC_Os03g07170 | Os03g0168000 | - | Detail |
| C2H3g13648 | 3:3,163,879-3,165,258 | - | C1H3g09927 | CX3g029073 | LOC_Os03g07180 | Os03g0168100 | - | Detail |
| C2H3g15532 | 3:3,166,957-3,168,740 | + | C1H3g29196 | CX3g027260 | LOC_Os03g07190 | Os03g0168200 | - | Detail |
| C2H3g27665 | 3:3,169,208-3,171,489 | - | C1H3g00563 | CX3g028572 | LOC_Os03g07200 | Os03g0168300 | - | Detail |
| C2H3g04176 | 3:3,176,410-3,180,324 | + | C1H3g28864 | CX3g029392 | LOC_Os03g07220 | Os03g0168400 | FLO10 | Detail |
| C2H3g16262 | 3:3,181,126-3,182,817 | - | C1H3g15091 | CX3g030074 | LOC_Os03g07226 | Os03g0168500 | - | Detail |
| C2H3g22195 | 3:3,186,278-3,187,912 | - | C1H3g30181 | CX3g027344 | LOC_Os03g07234 | Os03g0168550 | - | Detail |
| C2H3g27571 | 3:3,188,361-3,190,292 | - | C1H3g19869 | CX3g025173 | LOC_Os03g07250 | Os03g0168600 | CYP704B2, OsCYP704B2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000327 | 1:5,482,337-5,482,537 | - | - | - | - | - | - | Detail |
| CX1g003432 | 1:5,485,119-5,485,646 | + | - | C2H3g25696 | - | - | - | Detail |
| CX1g003866 | 1:5,496,797-5,498,872 | - | C1H1g17492 | C2H1g17634 | LOC_Os01g11570 | Os01g0214200 | - | Detail |
| CX1g004005 | 1:5,501,066-5,503,049 | + | C1H1g05723 | C2H1g27065 | LOC_Os01g11580 | Os01g0214300 | - | Detail |
| CX1g001697 | 1:5,507,828-5,509,761 | + | C1H1g20464 | C2H1g13662 | LOC_Os01g11590 | Os01g0214400 | - | Detail |
| CX1g002606 | 1:5,511,938-5,512,284 | + | C1H1g07596 | C2H1g29223 | LOC_Os01g11600 | Os01g0214500 | - | Detail |
| CX1g006288 | 1:5,555,835-5,556,209 | - | - | - | LOC_Os11g47039 | Os11g0692400 | - | Detail |
| CX1g001084 | 1:5,582,461-5,582,727 | + | - | - | - | - | - | Detail |
| CX1g002873 | 1:5,625,623-5,628,949 | - | C1H1g11369 | C2H1g01657 | LOC_Os01g11810 | Os01g0217000 | - | Detail |
| CX1g001632 | 1:5,632,459-5,633,585 | - | C1H1g25421 | C2H1g27711 | LOC_Os01g11830 | Os01g0330200 | - | Detail |
| CX1g005713 | 1:5,637,414-5,638,594 | + | C1H1g15985 | C2H1g08464 | LOC_Os01g11840 | Os01g0330200 | - | Detail |
| CX1g000279 | 1:5,639,601-5,642,048 | - | C1H1g06189 | C2H1g05180 | LOC_Os01g11850 | Os01g0217400 | - | Detail |
| CX1g005966 | 1:5,644,764-5,644,916 | + | C1H4g20138 | - | - | - | - | Detail |
| CX1g005289 | 1:5,645,835-5,651,902 | + | C1H1g09690 | C2H1g00290 | LOC_Os01g11860 | Os01g0217500 | - | Detail |
| CX1g006272 | 1:5,654,742-5,657,474 | + | C1H1g24673 | C2H1g04999 | LOC_Os01g11880 | Os01g0217800 | - | Detail |
| CX1g006867 | 1:5,665,995-5,677,254 | + | C1H1g21326 | C2H1g26585 | LOC_Os01g11900 | Os01g0218032 | ROS1A, ROS1a, OsROS1, TA2 | Detail |
| CX1g003932 | 1:5,686,225-5,687,188 | + | C1H1g12724 | C2H1g12652 | LOC_Os01g11910 | Os01g0218100 | - | Detail |
| CX1g004539 | 1:5,697,254-5,701,492 | + | C1H1g09961 | C2H1g17909 | LOC_Os01g11920 | Os01g0218200 | - | Detail |
| CX1g000608 | 1:5,713,663-5,718,794 | + | C1H1g30290 | C2H1g10690 | LOC_Os01g11940 | Os01g0218500 | - | Detail |
| CX1g003540 | 1:5,720,493-5,726,625 | - | C1H1g21863 | C2H1g22932 | LOC_Os01g11946 | Os01g0218700 | - | Detail |