| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g22539 | 2:30,516,116-30,517,963 | + | C1H2g21285 | CX2g023353 | LOC_Os02g54690 | Os02g0788300 | - | Detail |
| C2H2g09842 | 2:30,518,713-30,520,776 | + | C1H2g03966 | CX2g020480 | LOC_Os02g54700 | Os02g0788400 | - | Detail |
| C2H2g24143 | 2:30,521,277-30,523,108 | - | C1H2g22475 | CX2g024078 | LOC_Os02g54710 | Os02g0788500 | - | Detail |
| C2H2g15656 | 2:30,529,580-30,532,919 | - | C1H2g09302 | CX2g019873 | LOC_Os02g54720 | Os02g0788600 | - | Detail |
| C2H2g25995 | 2:30,538,001-30,543,899 | - | C1H2g25640 | CX2g020788 | LOC_Os02g54730 | Os02g0788800 | - | Detail |
| C2H2g28930 | 2:30,546,700-30,552,075 | - | C1H2g12627 | CX2g023773 | LOC_Os02g54760 | Os02g0789100 | OsCNGC10 | Detail |
| C2H2g03077 | 2:30,555,311-30,558,927 | - | C1H2g17369 | CX2g023326 | LOC_Os02g54770 | Os02g0789400 | - | Detail |
| C2H2g03583 | 2:30,559,151-30,562,261 | + | C1H2g16760 | CX2g020292 | LOC_Os02g54780 | Os02g0789600 | - | Detail |
| C2H2g28764 | 2:30,578,009-30,581,800 | + | C1H2g28936 | CX2g019192 | LOC_Os02g54820 | - | - | Detail |
| C2H2g18027 | 2:30,589,267-30,590,562 | - | C1H2g26730 | CX2g022920 | LOC_Os02g54830 | Os02g0790600 | - | Detail |
| C2H2g25577 | 2:30,598,574-30,602,394 | + | C1H2g00356 | CX2g021674 | LOC_Os02g54860 | Os02g0791200 | - | Detail |
| C2H2g06602 | 2:30,608,248-30,608,978 | + | C1H2g04350 | CX2g020291 | LOC_Os02g54870 | Os02g0791300 | - | Detail |
| C2H2g21305 | 2:30,611,842-30,613,444 | - | C1H2g01454 | - | LOC_Os02g54880 | Os02g0791400 | - | Detail |
| C2H2g22464 | 2:30,623,053-30,624,366 | + | C1H6g16664 | CX2g020757 | LOC_Os02g54890 | Os02g0791500 | - | Detail |
| C2H2g15982 | 2:30,627,865-30,634,072 | + | C1H2g04616 | CX2g020009 | LOC_Os02g54900 | Os02g0791700 | - | Detail |
| C2H2g15818 | 2:30,634,248-30,636,932 | - | C1H2g05157 | CX2g024185 | LOC_Os02g54910 | Os02g0791800 | - | Detail |
| C2H2g29953 | 2:30,642,638-30,646,423 | + | C1H2g17446 | CX2g022191 | LOC_Os02g54960 | Os02g0792500 | - | Detail |
| C2H2g09060 | 2:30,659,672-30,661,196 | + | C1H2g08469 | - | - | Os02g0792600 | - | Detail |
| C2H2g18872 | 2:30,666,400-30,668,034 | + | C1H2g23601 | CX2g022340 | LOC_Os02g54980 | Os02g0792800 | - | Detail |
| C2H2g11547 | 2:30,668,816-30,672,144 | - | C1H2g12232 | CX2g019277 | LOC_Os02g54990 | Os02g0792900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000327 | 1:5,482,337-5,482,537 | - | - | - | - | - | - | Detail |
| CX1g003432 | 1:5,485,119-5,485,646 | + | - | C2H3g25696 | - | - | - | Detail |
| CX1g003866 | 1:5,496,797-5,498,872 | - | C1H1g17492 | C2H1g17634 | LOC_Os01g11570 | Os01g0214200 | - | Detail |
| CX1g004005 | 1:5,501,066-5,503,049 | + | C1H1g05723 | C2H1g27065 | LOC_Os01g11580 | Os01g0214300 | - | Detail |
| CX1g001697 | 1:5,507,828-5,509,761 | + | C1H1g20464 | C2H1g13662 | LOC_Os01g11590 | Os01g0214400 | - | Detail |
| CX1g002606 | 1:5,511,938-5,512,284 | + | C1H1g07596 | C2H1g29223 | LOC_Os01g11600 | Os01g0214500 | - | Detail |
| CX1g006288 | 1:5,555,835-5,556,209 | - | - | - | LOC_Os11g47039 | Os11g0692400 | - | Detail |
| CX1g001084 | 1:5,582,461-5,582,727 | + | - | - | - | - | - | Detail |
| CX1g002873 | 1:5,625,623-5,628,949 | - | C1H1g11369 | C2H1g01657 | LOC_Os01g11810 | Os01g0217000 | - | Detail |
| CX1g001632 | 1:5,632,459-5,633,585 | - | C1H1g25421 | C2H1g27711 | LOC_Os01g11830 | Os01g0330200 | - | Detail |
| CX1g005713 | 1:5,637,414-5,638,594 | + | C1H1g15985 | C2H1g08464 | LOC_Os01g11840 | Os01g0330200 | - | Detail |
| CX1g000279 | 1:5,639,601-5,642,048 | - | C1H1g06189 | C2H1g05180 | LOC_Os01g11850 | Os01g0217400 | - | Detail |
| CX1g005966 | 1:5,644,764-5,644,916 | + | C1H4g20138 | - | - | - | - | Detail |
| CX1g005289 | 1:5,645,835-5,651,902 | + | C1H1g09690 | C2H1g00290 | LOC_Os01g11860 | Os01g0217500 | - | Detail |
| CX1g006272 | 1:5,654,742-5,657,474 | + | C1H1g24673 | C2H1g04999 | LOC_Os01g11880 | Os01g0217800 | - | Detail |
| CX1g006867 | 1:5,665,995-5,677,254 | + | C1H1g21326 | C2H1g26585 | LOC_Os01g11900 | Os01g0218032 | ROS1A, ROS1a, OsROS1, TA2 | Detail |
| CX1g003932 | 1:5,686,225-5,687,188 | + | C1H1g12724 | C2H1g12652 | LOC_Os01g11910 | Os01g0218100 | - | Detail |
| CX1g004539 | 1:5,697,254-5,701,492 | + | C1H1g09961 | C2H1g17909 | LOC_Os01g11920 | Os01g0218200 | - | Detail |
| CX1g000608 | 1:5,713,663-5,718,794 | + | C1H1g30290 | C2H1g10690 | LOC_Os01g11940 | Os01g0218500 | - | Detail |
| CX1g003540 | 1:5,720,493-5,726,625 | - | C1H1g21863 | C2H1g22932 | LOC_Os01g11946 | Os01g0218700 | - | Detail |