| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g24172 | 7:24,556,114-24,559,156 | - | - | CX7g047079 | - | - | - | Detail |
| C2H7g19394 | 7:24,559,801-24,561,552 | + | C1H7g14309 | CX3g027341 | LOC_Os07g49250 | Os07g0693100 | - | Detail |
| C2H7g18291 | 7:24,565,826-24,582,082 | + | C1H7g28070 | CX7g048782 | LOC_Os07g49270 | Os07g0693500 | - | Detail |
| C2H7g00587 | 7:24,582,222-24,586,934 | - | C1H7g12596 | CX7g046134 | LOC_Os07g49280 | Os07g0693600 | - | Detail |
| C2H7g28926 | 7:24,588,612-24,591,329 | - | C1H7g23269 | CX7g050224 | LOC_Os07g49290 | Os07g0173300 | qCTB7 | Detail |
| C2H7g26555 | 7:24,591,036-24,600,013 | + | C1H7g28065 | CX7g048290 | LOC_Os07g49300 | Os07g0693700 | - | Detail |
| C2H7g16809 | 7:24,600,670-24,603,092 | + | C1H7g30527 | CX7g046443 | LOC_Os07g49310 | Os07g0693800 | - | Detail |
| C2H7g22468 | 7:24,603,997-24,615,323 | + | C1H7g02758 | CX7g047911 | LOC_Os07g49320 | Os07g0693900 | - | Detail |
| C2H7g03488 | 7:24,615,713-24,618,783 | - | C1H7g23813 | CX7g049802 | LOC_Os07g49330 | Os07g0694000 | - | Detail |
| C2H7g11947 | 7:24,633,546-24,639,198 | - | C1H7g04846 | CX7g048511 | LOC_Os07g49370 | Os07g0694400 | OsIRX9, OsGT43C, OsGT43C/OsIRX9 | Detail |
| C2H7g21515 | 7:24,642,065-24,644,238 | + | C1H7g04330 | CX7g048246 | LOC_Os07g49380 | Os07g0694500 | - | Detail |
| C2H7g10645 | 7:24,645,075-24,648,493 | - | C1H7g06499 | CX7g048998 | LOC_Os07g49390 | Os07g0694600 | PDT | Detail |
| C2H7g29269 | 7:24,650,119-24,652,386 | - | C1H7g10754 | CX7g047831 | LOC_Os07g49400 | Os07g0694700 | APX2, OsAPX2, APXb | Detail |
| C2H7g08373 | 7:24,655,506-24,659,432 | - | C1H7g15269 | CX7g048258 | LOC_Os07g49410 | Os07g0694800 | - | Detail |
| C2H7g00903 | 7:24,667,339-24,679,657 | + | C1H7g06766 | CX7g048455 | LOC_Os07g49460 | Os07g0695100 | - | Detail |
| C2H7g12209 | 7:24,681,424-24,683,990 | + | C1H7g28034 | CX7g048022 | LOC_Os07g49470 | Os07g0695300 | - | Detail |
| C2H7g20370 | 7:24,684,099-24,688,611 | - | C1H7g26360 | CX7g049781 | LOC_Os07g49480 | Os07g0695400 | - | Detail |
| C2H7g29735 | 7:24,691,115-24,693,002 | + | C1H7g08926 | CX7g047215 | LOC_Os07g49510 | Os07g0695700 | - | Detail |
| C2H7g12536 | 7:24,695,021-24,700,738 | + | C1H7g03312 | CX7g046226 | LOC_Os07g49520 | Os07g0695800 | - | Detail |
| C2H7g18867 | 7:24,701,575-24,702,051 | + | C1H7g12414 | CX7g046250 | LOC_Os07g49530 | Os07g0695900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000327 | 1:5,482,337-5,482,537 | - | - | - | - | - | - | Detail |
| CX1g003432 | 1:5,485,119-5,485,646 | + | - | C2H3g25696 | - | - | - | Detail |
| CX1g003866 | 1:5,496,797-5,498,872 | - | C1H1g17492 | C2H1g17634 | LOC_Os01g11570 | Os01g0214200 | - | Detail |
| CX1g004005 | 1:5,501,066-5,503,049 | + | C1H1g05723 | C2H1g27065 | LOC_Os01g11580 | Os01g0214300 | - | Detail |
| CX1g001697 | 1:5,507,828-5,509,761 | + | C1H1g20464 | C2H1g13662 | LOC_Os01g11590 | Os01g0214400 | - | Detail |
| CX1g002606 | 1:5,511,938-5,512,284 | + | C1H1g07596 | C2H1g29223 | LOC_Os01g11600 | Os01g0214500 | - | Detail |
| CX1g006288 | 1:5,555,835-5,556,209 | - | - | - | LOC_Os11g47039 | Os11g0692400 | - | Detail |
| CX1g001084 | 1:5,582,461-5,582,727 | + | - | - | - | - | - | Detail |
| CX1g002873 | 1:5,625,623-5,628,949 | - | C1H1g11369 | C2H1g01657 | LOC_Os01g11810 | Os01g0217000 | - | Detail |
| CX1g001632 | 1:5,632,459-5,633,585 | - | C1H1g25421 | C2H1g27711 | LOC_Os01g11830 | Os01g0330200 | - | Detail |
| CX1g005713 | 1:5,637,414-5,638,594 | + | C1H1g15985 | C2H1g08464 | LOC_Os01g11840 | Os01g0330200 | - | Detail |
| CX1g000279 | 1:5,639,601-5,642,048 | - | C1H1g06189 | C2H1g05180 | LOC_Os01g11850 | Os01g0217400 | - | Detail |
| CX1g005966 | 1:5,644,764-5,644,916 | + | C1H4g20138 | - | - | - | - | Detail |
| CX1g005289 | 1:5,645,835-5,651,902 | + | C1H1g09690 | C2H1g00290 | LOC_Os01g11860 | Os01g0217500 | - | Detail |
| CX1g006272 | 1:5,654,742-5,657,474 | + | C1H1g24673 | C2H1g04999 | LOC_Os01g11880 | Os01g0217800 | - | Detail |
| CX1g006867 | 1:5,665,995-5,677,254 | + | C1H1g21326 | C2H1g26585 | LOC_Os01g11900 | Os01g0218032 | ROS1A, ROS1a, OsROS1, TA2 | Detail |
| CX1g003932 | 1:5,686,225-5,687,188 | + | C1H1g12724 | C2H1g12652 | LOC_Os01g11910 | Os01g0218100 | - | Detail |
| CX1g004539 | 1:5,697,254-5,701,492 | + | C1H1g09961 | C2H1g17909 | LOC_Os01g11920 | Os01g0218200 | - | Detail |
| CX1g000608 | 1:5,713,663-5,718,794 | + | C1H1g30290 | C2H1g10690 | LOC_Os01g11940 | Os01g0218500 | - | Detail |
| CX1g003540 | 1:5,720,493-5,726,625 | - | C1H1g21863 | C2H1g22932 | LOC_Os01g11946 | Os01g0218700 | - | Detail |