| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g17168 | 3:26,925,068-26,927,470 | + | C1H3g19413 | CX3g030963 | LOC_Os03g51240 | Os03g0722500 | - | Detail |
| C2H3g09804 | 3:26,927,684-26,932,236 | - | C1H3g19235 | CX3g028000 | LOC_Os03g51250 | Os03g0722600 | - | Detail |
| C2H3g23515 | 3:26,960,809-26,961,797 | + | C1H3g19621 | CX3g025582 | LOC_Os03g51340 | - | - | Detail |
| C2H3g08290 | 3:26,966,779-26,967,821 | + | C1H3g18910 | CX3g030020 | LOC_Os03g51350 | Os03g0723400 | - | Detail |
| C2H3g16773 | 3:26,974,616-26,978,336 | + | C1H3g18603 | CX3g027992 | LOC_Os03g51380 | Os03g0723600 | - | Detail |
| C2H3g17511 | 3:26,985,490-26,986,662 | - | - | - | - | - | - | Detail |
| C2H3g11512 | 3:27,005,216-27,006,777 | + | C1H3g29238 | CX3g025224 | LOC_Os03g51430 | Os03g0724100 | OsSec14-11 | Detail |
| C2H3g26453 | 3:27,008,365-27,012,042 | - | C1H3g20683 | CX3g028077 | LOC_Os03g51440 | Os03g0724300 | - | Detail |
| C2H3g05139 | 3:27,029,616-27,030,005 | - | C1H3g30120 | CX3g025441 | LOC_Os03g51459 | Os03g0724500 | - | Detail |
| C2H3g13019 | 3:27,032,755-27,034,727 | - | C1H3g05968 | CX3g025693 | LOC_Os03g51470 | Os03g0724600 | - | Detail |
| C2H3g05753 | 3:27,035,639-27,037,223 | + | C1H3g04363 | CX3g027196 | LOC_Os03g51479 | Os03g0724700 | - | Detail |
| C2H3g12890 | 3:27,045,422-27,045,733 | + | C1H3g15090 | CX3g028977 | LOC_Os03g51510 | Os03g0725000 | - | Detail |
| C2H3g20716 | 3:27,047,194-27,056,996 | + | C1H3g02037 | CX3g030919 | LOC_Os03g51520 | Os03g0725100 | - | Detail |
| C2H3g06290 | 3:27,058,656-27,064,437 | + | C1H3g18345 | CX3g029201 | LOC_Os03g51530 | Os03g0725200 | - | Detail |
| C2H3g04142 | 3:27,065,261-27,069,025 | + | C1H3g09008 | CX3g028312 | LOC_Os03g51550 | Os03g0725400 | - | Detail |
| C2H3g06970 | 3:27,096,786-27,099,211 | + | C1H3g28685 | CX3g029203 | LOC_Os03g51580 | Os03g0725800 | - | Detail |
| C2H3g30221 | 3:27,102,367-27,103,395 | + | - | - | - | - | - | Detail |
| C2H3g21598 | 3:27,113,077-27,116,055 | + | C1H3g18025 | CX3g026793 | LOC_Os03g51600 | Os03g0726100 | - | Detail |
| C2H3g10415 | 3:27,122,480-27,128,188 | + | C1H3g31013 | CX3g027533 | LOC_Os03g51610 | Os03g0726200 | - | Detail |
| C2H3g30083 | 3:27,130,646-27,135,460 | - | C1H3g03565 | CX3g030086 | LOC_Os03g51620 | Os03g0726300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g014589 | 11:2,547,325-2,548,155 | - | C1H5g21244 | - | - | - | - | Detail |
| CX11g012351 | 11:2,551,433-2,552,806 | + | C1H11g27939 | C2H11g10195 | LOC_Os11g06180 | Os11g0160550 | - | Detail |
| CX11g011615 | 11:2,554,716-2,560,179 | - | C1H11g27814 | C2H11g12866 | LOC_Os11g06190 | Os11g0160700 | - | Detail |
| CX11g012742 | 11:2,562,341-2,562,514 | + | - | - | - | Os01g0728000 | - | Detail |
| CX11g012788 | 11:2,622,605-2,623,258 | - | C1H11g18421 | C2H11g24027 | LOC_Os11g06330 | Os11g0162900 | - | Detail |
| CX11g011806 | 11:2,626,378-2,626,530 | - | - | - | - | - | - | Detail |
| CX11g014284 | 11:2,626,765-2,628,760 | + | C1H11g18421 | C2H11g24027 | LOC_Os11g06370 | Os11g0162900 | - | Detail |
| CX11g012450 | 11:2,641,330-2,643,818 | - | C1H11g30283 | C2H11g26879 | LOC_Os11g06340 | Os11g0162200 | - | Detail |
| CX11g015033 | 11:2,646,627-2,648,028 | + | C1H11g02065 | C2H11g23120 | LOC_Os11g06390 | Os11g0163100 | - | Detail |
| CX11g012639 | 11:2,652,972-2,654,285 | + | C1H11g04190 | C2H11g19653 | LOC_Os11g06410 | Os11g0163500 | OsGTγ-2, OsGTgamma-2 | Detail |
| CX11g011683 | 11:2,658,433-2,661,740 | + | C1H11g16178 | C2H11g14859 | LOC_Os11g06420 | Os11g0163600 | - | Detail |
| CX11g013924 | 11:2,672,434-2,673,693 | + | C1H11g03095 | - | LOC_Os11g06440 | Os11g0163800 | - | Detail |
| CX11g012043 | 11:2,678,178-2,680,388 | + | C1H11g08758 | C2H11g14523 | LOC_Os11g06610 | Os11g0166450 | - | Detail |
| CX11g012215 | 11:2,683,653-2,683,862 | - | C1H1g14515 | C2H11g08345 | - | - | - | Detail |
| CX11g012091 | 11:2,685,471-2,687,645 | - | C1H11g13349 | C2H11g15467 | LOC_Os11g06630 | Os11g0164200 | - | Detail |
| CX11g012644 | 11:2,703,028-2,705,497 | - | C1H11g24966 | C2H11g17104 | LOC_Os11g06650 | Os11g0166800 | - | Detail |
| CX11g014738 | 11:2,715,396-2,718,189 | + | C1H11g00608 | C2H11g23342 | LOC_Os11g06670 | Os11g0167200 | - | Detail |
| CX11g011541 | 11:2,719,412-2,723,314 | - | C1H11g07314 | C2H11g21586 | LOC_Os11g06680 | Os11g0167300 | - | Detail |
| CX11g013421 | 11:2,724,354-2,728,987 | + | C1H11g06481 | C2H11g08424 | LOC_Os11g06690 | Os11g0167500 | - | Detail |
| CX11g013419 | 11:2,734,183-2,736,267 | + | C1H11g25936 | C2H11g03577 | LOC_Os11g06700 | Os11g0167600 | - | Detail |