| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g09266 | 3:4,904,852-4,911,840 | + | C2H3g01278 | CX3g028760 | LOC_Os03g10780 | Os03g0205400 | - | Detail |
| C1H3g14529 | 3:4,913,544-4,918,530 | + | C2H3g28949 | CX3g029451 | LOC_Os03g10790 | Os03g0205500 | - | Detail |
| C1H3g24511 | 3:4,926,401-4,931,763 | + | C2H3g29987 | CX3g026705 | LOC_Os03g10800 | Os03g0205700 | - | Detail |
| C1H3g03568 | 3:4,936,763-4,938,229 | - | C2H3g05398 | CX3g029670 | LOC_Os03g10810 | Os03g0205800 | HHC3 | Detail |
| C1H3g13621 | 3:4,944,752-4,960,655 | - | C2H3g12127 | CX3g029010 | LOC_Os03g10820 | Os03g0762900 | - | Detail |
| C1H3g08320 | 3:4,965,861-4,966,886 | - | C2H3g24955 | CX3g025706 | - | Os03g0206201 | - | Detail |
| C1H3g31074 | 3:4,967,476-4,970,809 | - | - | - | - | - | - | Detail |
| C1H3g09000 | 3:4,977,714-4,978,093 | - | C2H3g09566 | CX3g025152 | LOC_Os03g10860 | Os03g0206400 | - | Detail |
| C1H3g23004 | 3:4,983,859-4,986,330 | + | C2H3g30671 | CX3g025216 | LOC_Os03g10870 | Os03g0206600 | - | Detail |
| C1H3g06410 | 3:4,987,578-4,990,347 | - | C2H3g08057 | CX3g028250 | LOC_Os03g10880 | Os03g0206700 | - | Detail |
| C1H3g27718 | 3:4,991,983-4,994,469 | + | C2H3g20915 | CX3g028910 | LOC_Os03g10890 | Os03g0206900 | - | Detail |
| C1H3g00893 | 3:5,011,803-5,014,766 | - | C2H3g10611 | CX3g026802 | LOC_Os03g10920 | Os03g0207200 | - | Detail |
| C1H3g01133 | 3:5,015,624-5,017,577 | - | C2H3g21091 | CX3g025332 | LOC_Os03g10930 | Os03g0207250 | - | Detail |
| C1H3g28849 | 3:5,018,053-5,022,776 | - | C2H3g16402 | CX3g026481 | LOC_Os03g10940 | Os03g0207300 | - | Detail |
| C1H3g06136 | 3:5,031,090-5,032,849 | + | C2H3g22551 | CX3g026300 | LOC_Os03g10950 | Os03g0207400 | - | Detail |
| C1H3g30385 | 3:5,036,888-5,039,139 | + | C2H3g27737 | CX3g028734 | LOC_Os03g10980 | Os03g0207800 | - | Detail |
| C1H3g09911 | 3:5,041,620-5,045,541 | - | C2H3g03380 | CX3g029045 | LOC_Os03g10990 | Os03g0207900 | - | Detail |
| C1H3g06609 | 3:5,046,661-5,050,805 | - | C2H3g00163 | CX3g026306 | LOC_Os03g11010 | Os03g0208500 | NRAMP2, OsNramp2, OsNRAMP2 | Detail |
| C1H3g30012 | 3:5,065,565-5,067,157 | + | C2H3g10069 | CX3g026296 | LOC_Os03g11020 | Os03g0208600 | - | Detail |
| C1H3g13525 | 3:5,069,353-5,072,403 | + | C2H3g05594 | CX3g026122 | LOC_Os03g11030 | Os03g0208700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g011656 | 11:1,579,155-1,579,310 | - | - | - | - | - | - | Detail |
| CX11g014910 | 11:1,581,129-1,581,407 | + | - | - | - | - | - | Detail |
| CX11g013028 | 11:1,585,083-1,588,787 | - | C1H11g10916 | C2H11g12290 | LOC_Os11g04440 | Os11g0140300 | - | Detail |
| CX11g011122 | 11:1,588,531-1,594,351 | + | C1H11g09070 | C2H11g17752 | LOC_Os11g04460 | Os11g0140400 | - | Detail |
| CX11g012037 | 11:1,594,904-1,595,995 | - | C1H11g26745 | C2H11g29740 | LOC_Os11g04470 | Os12g0137000 | - | Detail |
| CX11g014460 | 11:1,599,592-1,602,333 | - | C1H11g14617 | C2H11g03750 | LOC_Os11g04480 | Os11g0140600 | - | Detail |
| CX11g012718 | 11:1,605,592-1,606,029 | - | C1H11g09356 | - | - | - | - | Detail |
| CX11g011611 | 11:1,606,782-1,610,319 | + | C1H11g12960 | C2H11g19783 | LOC_Os11g04490 | Os11g0140700 | - | Detail |
| CX11g012756 | 11:1,611,495-1,614,560 | - | C1H11g00857 | C2H11g27118 | LOC_Os11g04500 | Os11g0140800 | - | Detail |
| CX11g011473 | 11:1,617,386-1,619,318 | + | C1H11g15053 | C2H11g01750 | LOC_Os11g04510 | Os11g0140900 | - | Detail |
| CX11g012138 | 11:1,621,759-1,625,572 | + | C1H11g21985 | C2H11g03399 | LOC_Os11g04520 | Os11g0141000 | - | Detail |
| CX11g012701 | 11:1,626,476-1,629,656 | - | C1H11g14326 | C2H11g25788 | LOC_Os11g04530 | Os11g0141333 | - | Detail |
| CX11g014914 | 11:1,635,075-1,636,091 | - | C1H11g14326 | C2H11g25788 | LOC_Os11g04550 | Os11g0141333 | - | Detail |
| CX11g014701 | 11:1,637,183-1,637,332 | + | - | - | - | - | - | Detail |
| CX11g013264 | 11:1,642,189-1,647,003 | - | C1H11g11783 | C2H11g05590 | LOC_Os11g04570 | Os11g0141550 | - | Detail |
| CX11g012094 | 11:1,649,794-1,651,353 | - | C1H11g11783 | C2H11g05590 | LOC_Os11g04590 | Os11g0141700 | - | Detail |
| CX11g013882 | 11:1,656,123-1,658,922 | + | C1H11g20784 | C2H11g04411 | LOC_Os11g04600 | Os11g0141900 | OsBOP2, NH5 | Detail |
| CX11g013509 | 11:1,672,037-1,673,740 | + | C1H11g21384 | C2H11g25781 | LOC_Os11g04660 | Os11g0142400 | - | Detail |
| CX11g011239 | 11:1,675,974-1,681,317 | + | C1H11g18499 | C2H11g09115 | LOC_Os11g04670 | Os11g0142500 | OsIPMS1 | Detail |
| CX11g013545 | 11:1,681,829-1,683,545 | + | C1H11g06310 | C2H11g05482 | LOC_Os11g04680 | Os11g0142800 | - | Detail |