| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g23079 | 3:9,133,882-9,135,042 | + | C1H3g02844 | CX3g028263 | LOC_Os03g18490 | Os03g0296200 | - | Detail |
| C2H3g17809 | 3:9,135,833-9,139,252 | - | C1H3g05929 | CX3g027261 | LOC_Os03g18500 | Os03g0296300 | - | Detail |
| C2H3g04518 | 3:9,139,685-9,142,850 | + | C1H3g03995 | CX3g027883 | LOC_Os03g18510 | Os03g0296400 | - | Detail |
| C2H3g25990 | 3:9,143,575-9,146,243 | + | C1H3g15230 | CX3g027567 | LOC_Os03g18520 | Os03g0296500 | - | Detail |
| C2H3g19945 | 3:9,146,997-9,147,446 | + | C1H3g03574 | CX3g030647 | LOC_Os03g18530 | Os03g0296600 | FEB1 | Detail |
| C2H3g00640 | 3:9,148,386-9,152,338 | + | C1H3g02938 | CX3g027501 | LOC_Os03g18540 | Os03g0296700 | - | Detail |
| C2H3g07011 | 3:9,155,313-9,158,353 | + | C1H3g26064 | CX3g028835 | LOC_Os03g18550 | Os03g0296800 | - | Detail |
| C2H3g30506 | 3:9,159,146-9,160,704 | - | C1H3g30555 | CX3g028050 | LOC_Os03g18560 | Os03g0297000 | - | Detail |
| C2H3g04349 | 3:9,160,635-9,162,662 | + | C1H3g07511 | CX3g026566 | LOC_Os03g18570 | Os03g0297100 | - | Detail |
| C2H3g12490 | 3:9,165,211-9,166,853 | + | C1H3g07511 | CX3g025475 | LOC_Os03g18570 | Os03g0297100 | - | Detail |
| C2H3g03893 | 3:9,168,997-9,172,486 | - | C1H3g00177 | CX3g027573 | LOC_Os03g18590 | Os03g0297400 | - | Detail |
| C2H3g00141 | 3:9,185,454-9,186,137 | - | C1H3g05450 | CX3g025598 | LOC_Os03g18600 | Os03g0297600 | OsPYL6 | Detail |
| C2H3g24611 | 3:9,199,178-9,201,773 | + | C1H3g01318 | CX3g026248 | LOC_Os03g18620 | Os03g0297700 | - | Detail |
| C2H3g04152 | 3:9,203,202-9,206,254 | + | C1H3g30188 | CX3g031004 | LOC_Os03g18630 | Os03g0297800 | - | Detail |
| C2H3g14622 | 3:9,214,653-9,217,676 | + | C1H3g16689 | CX3g028886 | LOC_Os03g18640 | Os03g0297900 | - | Detail |
| C2H3g25925 | 3:9,222,243-9,222,791 | + | C1H3g05714 | CX3g026355 | LOC_Os03g18660 | Os03g0298100 | - | Detail |
| C2H3g06802 | 3:9,223,577-9,224,848 | + | - | - | - | - | - | Detail |
| C2H3g07384 | 3:9,227,113-9,229,173 | + | C1H3g07440 | CX3g027215 | LOC_Os03g18680 | Os03g0298300 | - | Detail |
| C2H3g24260 | 3:9,232,330-9,236,086 | + | C1H3g06475 | CX3g025175 | LOC_Os03g18690 | Os03g0298400 | - | Detail |
| C2H3g02615 | 3:9,237,225-9,239,655 | - | C1H3g27200 | CX3g031330 | LOC_Os03g18700 | Os03g0298600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004422 | 1:5,259,813-5,263,252 | - | C1H1g22199 | C2H1g00003 | LOC_Os01g11150 | Os01g0209700 | GA2ox7 | Detail |
| CX1g004758 | 1:5,274,970-5,277,044 | - | C1H1g04985 | C2H1g04035 | LOC_Os01g11160 | Os01g0209800 | - | Detail |
| CX1g006209 | 1:5,283,182-5,283,353 | + | - | - | - | - | - | Detail |
| CX1g006771 | 1:5,287,260-5,288,920 | - | C1H1g26396 | C2H1g16459 | LOC_Os01g11200 | Os01g0210200 | - | Detail |
| CX1g001982 | 1:5,290,346-5,291,557 | + | C1H1g27615 | C2H1g10978 | LOC_Os01g11210 | Os01g0210300 | - | Detail |
| CX1g004173 | 1:5,291,834-5,293,957 | - | C1H1g05366 | C2H1g29549 | LOC_Os01g11220 | Os01g0210400 | OsTOD1 | Detail |
| CX1g001527 | 1:5,294,847-5,295,658 | - | C1H1g22960 | C2H1g12111 | LOC_Os01g11230 | Os01g0210500 | - | Detail |
| CX1g004127 | 1:5,298,536-5,299,036 | - | - | C2H1g23743 | LOC_Os01g11240 | Os01g0210600 | - | Detail |
| CX1g003904 | 1:5,303,489-5,305,102 | + | - | - | - | - | - | Detail |
| CX1g004305 | 1:5,306,611-5,306,781 | + | - | - | - | - | - | Detail |
| CX1g000720 | 1:5,308,155-5,310,443 | + | - | - | - | - | - | Detail |
| CX1g002610 | 1:5,309,248-5,313,113 | - | C1H1g12886 | C2H1g05349 | LOC_Os01g11250 | Os01g0210700 | KAT2, OsKAT2 | Detail |
| CX1g004526 | 1:5,316,480-5,320,681 | + | C1H1g30027 | C2H1g07302 | LOC_Os01g11260 | Os01g0210800 | - | Detail |
| CX1g006413 | 1:5,381,547-5,393,635 | + | C1H1g25024 | C2H1g30364 | LOC_Os01g11370 | Os01g0212100 | - | Detail |
| CX1g004990 | 1:5,402,080-5,407,002 | + | C1H1g24516 | C2H1g07400 | LOC_Os01g11414 | Os01g0212400 | - | Detail |
| CX1g007192 | 1:5,407,844-5,409,568 | - | C1H1g10197 | C2H1g07852 | LOC_Os01g11430 | Os01g0212500 | OsTIE1 | Detail |
| CX1g006430 | 1:5,420,747-5,420,992 | - | - | - | - | - | - | Detail |
| CX1g000251 | 1:5,448,257-5,450,074 | + | - | C2H1g03845 | LOC_Os01g11510 | Os01g0213300 | - | Detail |
| CX1g001182 | 1:5,456,522-5,457,226 | - | C1H1g26340 | C2H1g20281 | LOC_Os01g11520 | Os01g0213400 | - | Detail |
| CX1g004394 | 1:5,472,691-5,474,076 | - | C1H1g28036 | C2H1g27187 | LOC_Os01g11550 | Os01g0213800 | OsPCF5, PCF5, OsTCP1, OsTCP1/PCF5 | Detail |