| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g16347 | 2:30,115,656-30,117,442 | + | C1H2g26979 | CX2g020913 | LOC_Os02g53820 | Os02g0778600 | - | Detail |
| C2H2g05546 | 2:30,119,634-30,122,197 | + | C1H2g20759 | CX2g021136 | LOC_Os02g53830 | Os02g0778700 | - | Detail |
| C2H2g20229 | 2:30,129,753-30,132,309 | + | C1H2g16389 | CX2g024877 | LOC_Os02g53840 | Os02g0778900 | - | Detail |
| C2H2g13528 | 2:30,133,591-30,135,933 | - | C1H2g16389 | CX2g024877 | LOC_Os02g53860 | Os02g0779200 | - | Detail |
| C2H2g06321 | 2:30,139,483-30,139,872 | + | - | - | LOC_Os02g53870 | Os02g0779300 | - | Detail |
| C2H2g26913 | 2:30,143,640-30,143,966 | + | - | - | LOC_Os02g53880 | Os02g0779400 | - | Detail |
| C2H2g27242 | 2:30,153,207-30,155,558 | - | C1H2g10460 | CX2g019392 | LOC_Os02g53970 | Os02g0780200 | - | Detail |
| C2H2g04949 | 2:30,162,103-30,171,266 | + | C1H2g22801 | CX2g019056 | LOC_Os02g53990 | Os02g0780500 | - | Detail |
| C2H2g19319 | 2:30,172,632-30,176,833 | + | C1H2g24524 | CX2g024698 | LOC_Os02g53994 | Os02g0780550 | - | Detail |
| C2H2g11658 | 2:30,179,039-30,181,634 | - | C1H2g12063 | CX4g035307 | - | - | - | Detail |
| C2H2g26635 | 2:30,180,344-30,183,941 | + | C1H2g04563 | - | LOC_Os02g54000 | Os02g0780600 | - | Detail |
| C2H2g14758 | 2:30,186,771-30,191,988 | + | C1H2g14739 | CX2g022418 | LOC_Os02g54010 | Os02g0780700 | - | Detail |
| C2H2g11190 | 2:30,192,278-30,201,255 | - | C1H2g16831 | CX2g024583 | LOC_Os02g54020 | Os02g0780800 | - | Detail |
| C2H2g07818 | 2:30,202,771-30,206,272 | + | C1H2g07693 | CX2g019901 | LOC_Os02g54030 | Os02g0781000 | - | Detail |
| C2H2g09270 | 2:30,212,572-30,213,201 | - | C1H2g17781 | CX2g022057 | LOC_Os02g54050 | Os02g0781300 | - | Detail |
| C2H2g06946 | 2:30,219,795-30,222,417 | - | C1H2g20398 | CX2g022208 | LOC_Os02g54060 | Os02g0781400 | - | Detail |
| C2H2g24815 | 2:30,224,551-30,230,983 | + | C1H2g19411 | CX2g024364 | - | Os02g0781600 | - | Detail |
| C2H2g27515 | 2:30,231,162-30,234,517 | - | C1H2g07208 | CX2g023222 | LOC_Os02g54080 | Os02g0781700 | - | Detail |
| C2H2g07112 | 2:30,235,825-30,240,150 | - | C1H2g11296 | CX2g022259 | LOC_Os02g54090 | Os02g0159400 | - | Detail |
| C2H2g01294 | 2:30,243,982-30,249,118 | + | C1H2g26194 | CX2g024788 | LOC_Os02g54100 | Os02g0781900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004422 | 1:5,259,813-5,263,252 | - | C1H1g22199 | C2H1g00003 | LOC_Os01g11150 | Os01g0209700 | GA2ox7 | Detail |
| CX1g004758 | 1:5,274,970-5,277,044 | - | C1H1g04985 | C2H1g04035 | LOC_Os01g11160 | Os01g0209800 | - | Detail |
| CX1g006209 | 1:5,283,182-5,283,353 | + | - | - | - | - | - | Detail |
| CX1g006771 | 1:5,287,260-5,288,920 | - | C1H1g26396 | C2H1g16459 | LOC_Os01g11200 | Os01g0210200 | - | Detail |
| CX1g001982 | 1:5,290,346-5,291,557 | + | C1H1g27615 | C2H1g10978 | LOC_Os01g11210 | Os01g0210300 | - | Detail |
| CX1g004173 | 1:5,291,834-5,293,957 | - | C1H1g05366 | C2H1g29549 | LOC_Os01g11220 | Os01g0210400 | OsTOD1 | Detail |
| CX1g001527 | 1:5,294,847-5,295,658 | - | C1H1g22960 | C2H1g12111 | LOC_Os01g11230 | Os01g0210500 | - | Detail |
| CX1g004127 | 1:5,298,536-5,299,036 | - | - | C2H1g23743 | LOC_Os01g11240 | Os01g0210600 | - | Detail |
| CX1g003904 | 1:5,303,489-5,305,102 | + | - | - | - | - | - | Detail |
| CX1g004305 | 1:5,306,611-5,306,781 | + | - | - | - | - | - | Detail |
| CX1g000720 | 1:5,308,155-5,310,443 | + | - | - | - | - | - | Detail |
| CX1g002610 | 1:5,309,248-5,313,113 | - | C1H1g12886 | C2H1g05349 | LOC_Os01g11250 | Os01g0210700 | KAT2, OsKAT2 | Detail |
| CX1g004526 | 1:5,316,480-5,320,681 | + | C1H1g30027 | C2H1g07302 | LOC_Os01g11260 | Os01g0210800 | - | Detail |
| CX1g006413 | 1:5,381,547-5,393,635 | + | C1H1g25024 | C2H1g30364 | LOC_Os01g11370 | Os01g0212100 | - | Detail |
| CX1g004990 | 1:5,402,080-5,407,002 | + | C1H1g24516 | C2H1g07400 | LOC_Os01g11414 | Os01g0212400 | - | Detail |
| CX1g007192 | 1:5,407,844-5,409,568 | - | C1H1g10197 | C2H1g07852 | LOC_Os01g11430 | Os01g0212500 | OsTIE1 | Detail |
| CX1g006430 | 1:5,420,747-5,420,992 | - | - | - | - | - | - | Detail |
| CX1g000251 | 1:5,448,257-5,450,074 | + | - | C2H1g03845 | LOC_Os01g11510 | Os01g0213300 | - | Detail |
| CX1g001182 | 1:5,456,522-5,457,226 | - | C1H1g26340 | C2H1g20281 | LOC_Os01g11520 | Os01g0213400 | - | Detail |
| CX1g004394 | 1:5,472,691-5,474,076 | - | C1H1g28036 | C2H1g27187 | LOC_Os01g11550 | Os01g0213800 | OsPCF5, PCF5, OsTCP1, OsTCP1/PCF5 | Detail |