| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g09023 | 2:28,883,424-28,889,951 | - | C1H2g09736 | CX2g024878 | LOC_Os02g51490 | Os02g0750500 | - | Detail |
| C2H2g29295 | 2:28,899,188-28,899,640 | + | C1H2g05316 | CX2g021234 | LOC_Os02g51510 | Os02g0750800 | - | Detail |
| C2H2g18252 | 2:28,906,507-28,906,797 | + | C1H2g12338 | CX2g019178 | LOC_Os02g51510 | Os02g0750800 | - | Detail |
| C2H2g00480 | 2:28,910,982-28,920,508 | + | C1H2g20477 | CX2g021459 | LOC_Os02g51540 | Os02g0751100 | - | Detail |
| C2H2g18102 | 2:28,920,993-28,921,853 | + | C1H2g11542 | CX2g023217 | - | Os02g0530100 | - | Detail |
| C2H2g27297 | 2:28,926,822-28,928,083 | + | C1H2g23507 | CX2g024689 | LOC_Os02g51550 | Os02g0751300 | - | Detail |
| C2H2g09668 | 2:28,934,411-28,936,376 | - | C1H2g14472 | CX2g022461 | LOC_Os02g54440 | Os02g0785600 | - | Detail |
| C2H2g05502 | 2:28,939,859-28,941,687 | + | C1H2g10225 | CX2g023575 | LOC_Os02g51570 | Os02g0751600 | - | Detail |
| C2H2g01740 | 2:28,944,740-28,947,221 | + | C1H2g09134 | CX2g023297 | LOC_Os02g51590 | Os02g0751800 | - | Detail |
| C2H2g28626 | 2:28,947,999-28,949,981 | + | C1H2g31734 | CX2g019962 | LOC_Os02g51600 | Os02g0751900 | - | Detail |
| C2H2g07369 | 2:28,951,233-28,954,751 | - | C1H2g23156 | CX2g021849 | LOC_Os02g51610 | Os02g0752000 | OsSec14-10 | Detail |
| C2H2g06010 | 2:28,957,688-28,958,984 | + | C1H2g16266 | CX2g022840 | LOC_Os02g34310 | Os02g0547300 | - | Detail |
| C2H2g12634 | 2:28,959,585-28,964,177 | - | C1H2g15198 | CX2g021790 | LOC_Os02g51620 | Os02g0752200 | - | Detail |
| C2H2g23563 | 2:28,971,137-28,972,330 | - | C1H2g27235 | CX2g020852 | LOC_Os02g51640 | Os02g0752300 | - | Detail |
| C2H2g08856 | 2:28,975,977-28,977,757 | + | C1H2g16254 | CX2g024490 | LOC_Os02g51660 | Os02g0752600 | - | Detail |
| C2H2g07661 | 2:28,989,512-28,990,528 | + | C1H2g23870 | CX2g024326 | LOC_Os02g51670 | Os02g0752800 | - | Detail |
| C2H2g27937 | 2:28,994,836-28,995,057 | + | C1H6g15800 | - | - | - | - | Detail |
| C2H2g08284 | 2:29,006,619-29,009,826 | + | C1H2g00963 | CX2g021449 | LOC_Os02g51680 | Os02g0753000 | - | Detail |
| C2H2g25596 | 2:29,017,388-29,019,477 | + | C1H2g18992 | CX2g018924 | LOC_Os02g51700 | Os02g0753200 | - | Detail |
| C2H2g02815 | 2:29,020,307-29,020,956 | + | C1H2g26243 | CX2g018987 | LOC_Os02g51710 | Os02g0753300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004422 | 1:5,259,813-5,263,252 | - | C1H1g22199 | C2H1g00003 | LOC_Os01g11150 | Os01g0209700 | GA2ox7 | Detail |
| CX1g004758 | 1:5,274,970-5,277,044 | - | C1H1g04985 | C2H1g04035 | LOC_Os01g11160 | Os01g0209800 | - | Detail |
| CX1g006209 | 1:5,283,182-5,283,353 | + | - | - | - | - | - | Detail |
| CX1g006771 | 1:5,287,260-5,288,920 | - | C1H1g26396 | C2H1g16459 | LOC_Os01g11200 | Os01g0210200 | - | Detail |
| CX1g001982 | 1:5,290,346-5,291,557 | + | C1H1g27615 | C2H1g10978 | LOC_Os01g11210 | Os01g0210300 | - | Detail |
| CX1g004173 | 1:5,291,834-5,293,957 | - | C1H1g05366 | C2H1g29549 | LOC_Os01g11220 | Os01g0210400 | OsTOD1 | Detail |
| CX1g001527 | 1:5,294,847-5,295,658 | - | C1H1g22960 | C2H1g12111 | LOC_Os01g11230 | Os01g0210500 | - | Detail |
| CX1g004127 | 1:5,298,536-5,299,036 | - | - | C2H1g23743 | LOC_Os01g11240 | Os01g0210600 | - | Detail |
| CX1g003904 | 1:5,303,489-5,305,102 | + | - | - | - | - | - | Detail |
| CX1g004305 | 1:5,306,611-5,306,781 | + | - | - | - | - | - | Detail |
| CX1g000720 | 1:5,308,155-5,310,443 | + | - | - | - | - | - | Detail |
| CX1g002610 | 1:5,309,248-5,313,113 | - | C1H1g12886 | C2H1g05349 | LOC_Os01g11250 | Os01g0210700 | KAT2, OsKAT2 | Detail |
| CX1g004526 | 1:5,316,480-5,320,681 | + | C1H1g30027 | C2H1g07302 | LOC_Os01g11260 | Os01g0210800 | - | Detail |
| CX1g006413 | 1:5,381,547-5,393,635 | + | C1H1g25024 | C2H1g30364 | LOC_Os01g11370 | Os01g0212100 | - | Detail |
| CX1g004990 | 1:5,402,080-5,407,002 | + | C1H1g24516 | C2H1g07400 | LOC_Os01g11414 | Os01g0212400 | - | Detail |
| CX1g007192 | 1:5,407,844-5,409,568 | - | C1H1g10197 | C2H1g07852 | LOC_Os01g11430 | Os01g0212500 | OsTIE1 | Detail |
| CX1g006430 | 1:5,420,747-5,420,992 | - | - | - | - | - | - | Detail |
| CX1g000251 | 1:5,448,257-5,450,074 | + | - | C2H1g03845 | LOC_Os01g11510 | Os01g0213300 | - | Detail |
| CX1g001182 | 1:5,456,522-5,457,226 | - | C1H1g26340 | C2H1g20281 | LOC_Os01g11520 | Os01g0213400 | - | Detail |
| CX1g004394 | 1:5,472,691-5,474,076 | - | C1H1g28036 | C2H1g27187 | LOC_Os01g11550 | Os01g0213800 | OsPCF5, PCF5, OsTCP1, OsTCP1/PCF5 | Detail |