| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g15283 | 1:7,809,141-7,814,353 | - | C1H1g11696 | CX1g001399 | LOC_Os01g15460 | Os01g0258700 | - | Detail |
| C2H1g09950 | 1:7,831,353-7,835,827 | + | C1H1g20506 | CX1g003110 | LOC_Os01g15470 | Os01g0259200 | - | Detail |
| C2H1g28752 | 1:7,839,649-7,847,498 | - | C1H1g17517 | CX1g001265 | LOC_Os01g15480 | Os01g0259400 | - | Detail |
| C2H1g29310 | 1:7,848,020-7,855,689 | - | C1H1g01918 | CX1g004135 | LOC_Os01g15490 | Os01g0259600 | - | Detail |
| C2H1g13360 | 1:7,865,841-7,869,695 | + | C1H1g28512 | CX1g001587 | LOC_Os01g15520 | Os01g0259900 | SAD1L | Detail |
| C2H1g29005 | 1:7,881,621-7,883,132 | + | C1H1g06480 | CX1g001422 | LOC_Os01g15530 | Os01g0260000 | - | Detail |
| C2H1g27356 | 1:7,883,984-7,890,551 | - | C1H1g08431 | CX1g003982 | LOC_Os01g15540 | Os01g0260100 | - | Detail |
| C2H1g20732 | 1:7,898,552-7,902,451 | + | C1H1g24472 | CX1g000418 | LOC_Os01g15580 | Os01g0260500 | - | Detail |
| C2H1g27729 | 1:7,908,196-7,911,965 | + | C1H1g25542 | CX1g006574 | LOC_Os01g15600 | Os01g0260700 | OsPurα | Detail |
| C2H1g08136 | 1:7,915,914-7,921,724 | + | C1H1g03478 | CX1g004819 | LOC_Os01g15610 | Os01g0260800 | OsCIF2 | Detail |
| C2H1g00172 | 1:7,925,619-7,926,041 | + | - | - | - | Os01g0260950 | - | Detail |
| C2H1g02816 | 1:7,928,299-7,934,071 | + | C1H1g30736 | CX1g004757 | LOC_Os01g15630 | Os01g0261100 | - | Detail |
| C2H1g13520 | 1:7,934,395-7,938,688 | - | C1H1g05155 | CX1g003663 | LOC_Os01g15640 | Os01g0261200 | - | Detail |
| C2H1g20114 | 1:7,943,990-7,947,448 | + | C1H1g07642 | CX1g001002 | LOC_Os01g15660 | Os01g0261500 | - | Detail |
| C2H1g06642 | 1:7,949,906-7,951,357 | - | C1H1g29935 | CX1g006778 | LOC_Os01g15709 | Os01g0261700 | - | Detail |
| C2H1g12900 | 1:7,954,014-7,955,420 | - | C1H1g11248 | CX1g000782 | LOC_Os01g15709 | Os01g0261700 | - | Detail |
| C2H1g12284 | 1:7,961,586-7,962,748 | - | C1H1g21194 | CX1g006778 | LOC_Os01g15709 | Os01g0261700 | - | Detail |
| C2H1g07674 | 1:7,977,804-7,979,718 | + | C1H1g29482 | CX1g000618 | LOC_Os01g15770 | Os01g0262500 | - | Detail |
| C2H1g00956 | 1:7,979,872-7,985,777 | - | C1H1g02857 | CX1g004525 | LOC_Os01g15780 | Os01g0262600 | OsGT1 | Detail |
| C2H1g29692 | 1:7,988,537-7,995,739 | + | C1H1g17535 | CX1g007017 | LOC_Os01g15790 | Os01g0262700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004422 | 1:5,259,813-5,263,252 | - | C1H1g22199 | C2H1g00003 | LOC_Os01g11150 | Os01g0209700 | GA2ox7 | Detail |
| CX1g004758 | 1:5,274,970-5,277,044 | - | C1H1g04985 | C2H1g04035 | LOC_Os01g11160 | Os01g0209800 | - | Detail |
| CX1g006209 | 1:5,283,182-5,283,353 | + | - | - | - | - | - | Detail |
| CX1g006771 | 1:5,287,260-5,288,920 | - | C1H1g26396 | C2H1g16459 | LOC_Os01g11200 | Os01g0210200 | - | Detail |
| CX1g001982 | 1:5,290,346-5,291,557 | + | C1H1g27615 | C2H1g10978 | LOC_Os01g11210 | Os01g0210300 | - | Detail |
| CX1g004173 | 1:5,291,834-5,293,957 | - | C1H1g05366 | C2H1g29549 | LOC_Os01g11220 | Os01g0210400 | OsTOD1 | Detail |
| CX1g001527 | 1:5,294,847-5,295,658 | - | C1H1g22960 | C2H1g12111 | LOC_Os01g11230 | Os01g0210500 | - | Detail |
| CX1g004127 | 1:5,298,536-5,299,036 | - | - | C2H1g23743 | LOC_Os01g11240 | Os01g0210600 | - | Detail |
| CX1g003904 | 1:5,303,489-5,305,102 | + | - | - | - | - | - | Detail |
| CX1g004305 | 1:5,306,611-5,306,781 | + | - | - | - | - | - | Detail |
| CX1g000720 | 1:5,308,155-5,310,443 | + | - | - | - | - | - | Detail |
| CX1g002610 | 1:5,309,248-5,313,113 | - | C1H1g12886 | C2H1g05349 | LOC_Os01g11250 | Os01g0210700 | KAT2, OsKAT2 | Detail |
| CX1g004526 | 1:5,316,480-5,320,681 | + | C1H1g30027 | C2H1g07302 | LOC_Os01g11260 | Os01g0210800 | - | Detail |
| CX1g006413 | 1:5,381,547-5,393,635 | + | C1H1g25024 | C2H1g30364 | LOC_Os01g11370 | Os01g0212100 | - | Detail |
| CX1g004990 | 1:5,402,080-5,407,002 | + | C1H1g24516 | C2H1g07400 | LOC_Os01g11414 | Os01g0212400 | - | Detail |
| CX1g007192 | 1:5,407,844-5,409,568 | - | C1H1g10197 | C2H1g07852 | LOC_Os01g11430 | Os01g0212500 | OsTIE1 | Detail |
| CX1g006430 | 1:5,420,747-5,420,992 | - | - | - | - | - | - | Detail |
| CX1g000251 | 1:5,448,257-5,450,074 | + | - | C2H1g03845 | LOC_Os01g11510 | Os01g0213300 | - | Detail |
| CX1g001182 | 1:5,456,522-5,457,226 | - | C1H1g26340 | C2H1g20281 | LOC_Os01g11520 | Os01g0213400 | - | Detail |
| CX1g004394 | 1:5,472,691-5,474,076 | - | C1H1g28036 | C2H1g27187 | LOC_Os01g11550 | Os01g0213800 | OsPCF5, PCF5, OsTCP1, OsTCP1/PCF5 | Detail |