| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g30468 | 9:5,215,052-5,217,625 | + | C1H9g26618 | CX9g056996 | LOC_Os09g17930 | - | - | Detail |
| C2H9g14875 | 9:5,239,921-5,244,674 | + | C1H9g19087 | CX9g056264 | LOC_Os09g10820 | Os09g0280300 | - | Detail |
| C2H9g18640 | 9:5,258,980-5,263,576 | + | C1H9g14814 | CX9g056963 | LOC_Os09g11120 | - | - | Detail |
| C2H9g03130 | 9:5,332,785-5,343,319 | + | C1H9g25712 | CX9g056789 | LOC_Os09g10840 | Os09g0280500 | - | Detail |
| C2H9g29830 | 9:5,346,733-5,354,157 | - | C1H9g13805 | CX9g056465 | LOC_Os09g10850 | Os09g0280600 | OsMFS1 | Detail |
| C2H9g25342 | 9:5,406,759-5,408,302 | - | C1H9g06262 | CX9g056244 | LOC_Os09g10910 | Os09g0281300 | - | Detail |
| C2H9g00970 | 9:5,420,033-5,424,074 | + | C1H9g30004 | CX9g054856 | LOC_Os09g10930 | Os09g0281600 | - | Detail |
| C2H9g25828 | 9:5,425,529-5,429,205 | + | C1H9g25733 | CX9g055566 | LOC_Os09g10940 | Os09g0281700 | - | Detail |
| C2H9g04057 | 9:5,434,685-5,438,435 | + | C1H9g02726 | CX9g056551 | LOC_Os09g10950 | Os09g0281800 | - | Detail |
| C2H9g06979 | 9:5,444,288-5,456,832 | - | C1H9g26657 | CX9g056165 | LOC_Os09g10960 | Os09g0281900 | - | Detail |
| C2H9g30281 | 9:5,469,455-5,469,895 | - | C1H9g17778 | CX9g055297 | LOC_Os09g10980 | Os09g0282100 | - | Detail |
| C2H9g26900 | 9:5,473,675-5,474,193 | - | C1H9g16588 | CX9g058190 | LOC_Os09g10980 | Os09g0282300 | - | Detail |
| C2H9g15409 | 9:5,617,864-5,618,046 | - | - | CX9g058176 | - | Os09g0283200 | - | Detail |
| C2H9g23549 | 9:5,651,387-5,652,494 | + | C1H9g28469 | CX9g056406 | LOC_Os09g11170 | Os09g0283600 | - | Detail |
| C2H9g18844 | 9:5,710,680-5,711,536 | - | - | CX9g055278 | LOC_Os09g11220 | - | - | Detail |
| C2H9g29385 | 9:5,717,102-5,717,338 | - | - | CX9g055683 | - | - | - | Detail |
| C2H9g02512 | 9:5,719,355-5,723,956 | + | C1H9g00489 | CX9g058079 | LOC_Os09g11230 | Os09g0284200 | - | Detail |
| C2H9g29412 | 9:5,725,994-5,728,559 | + | C1H9g17976 | CX9g056754 | LOC_Os09g11240 | Os09g0284300 | - | Detail |
| C2H9g18317 | 9:5,733,138-5,736,334 | - | C1H9g18575 | CX9g055562 | LOC_Os09g11250 | Os09g0284400 | - | Detail |
| C2H9g18253 | 9:5,738,808-5,747,670 | - | C1H9g18907 | CX9g055837 | LOC_Os09g11270 | Os09g0284600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004422 | 1:5,259,813-5,263,252 | - | C1H1g22199 | C2H1g00003 | LOC_Os01g11150 | Os01g0209700 | GA2ox7 | Detail |
| CX1g004758 | 1:5,274,970-5,277,044 | - | C1H1g04985 | C2H1g04035 | LOC_Os01g11160 | Os01g0209800 | - | Detail |
| CX1g006209 | 1:5,283,182-5,283,353 | + | - | - | - | - | - | Detail |
| CX1g006771 | 1:5,287,260-5,288,920 | - | C1H1g26396 | C2H1g16459 | LOC_Os01g11200 | Os01g0210200 | - | Detail |
| CX1g001982 | 1:5,290,346-5,291,557 | + | C1H1g27615 | C2H1g10978 | LOC_Os01g11210 | Os01g0210300 | - | Detail |
| CX1g004173 | 1:5,291,834-5,293,957 | - | C1H1g05366 | C2H1g29549 | LOC_Os01g11220 | Os01g0210400 | OsTOD1 | Detail |
| CX1g001527 | 1:5,294,847-5,295,658 | - | C1H1g22960 | C2H1g12111 | LOC_Os01g11230 | Os01g0210500 | - | Detail |
| CX1g004127 | 1:5,298,536-5,299,036 | - | - | C2H1g23743 | LOC_Os01g11240 | Os01g0210600 | - | Detail |
| CX1g003904 | 1:5,303,489-5,305,102 | + | - | - | - | - | - | Detail |
| CX1g004305 | 1:5,306,611-5,306,781 | + | - | - | - | - | - | Detail |
| CX1g000720 | 1:5,308,155-5,310,443 | + | - | - | - | - | - | Detail |
| CX1g002610 | 1:5,309,248-5,313,113 | - | C1H1g12886 | C2H1g05349 | LOC_Os01g11250 | Os01g0210700 | KAT2, OsKAT2 | Detail |
| CX1g004526 | 1:5,316,480-5,320,681 | + | C1H1g30027 | C2H1g07302 | LOC_Os01g11260 | Os01g0210800 | - | Detail |
| CX1g006413 | 1:5,381,547-5,393,635 | + | C1H1g25024 | C2H1g30364 | LOC_Os01g11370 | Os01g0212100 | - | Detail |
| CX1g004990 | 1:5,402,080-5,407,002 | + | C1H1g24516 | C2H1g07400 | LOC_Os01g11414 | Os01g0212400 | - | Detail |
| CX1g007192 | 1:5,407,844-5,409,568 | - | C1H1g10197 | C2H1g07852 | LOC_Os01g11430 | Os01g0212500 | OsTIE1 | Detail |
| CX1g006430 | 1:5,420,747-5,420,992 | - | - | - | - | - | - | Detail |
| CX1g000251 | 1:5,448,257-5,450,074 | + | - | C2H1g03845 | LOC_Os01g11510 | Os01g0213300 | - | Detail |
| CX1g001182 | 1:5,456,522-5,457,226 | - | C1H1g26340 | C2H1g20281 | LOC_Os01g11520 | Os01g0213400 | - | Detail |
| CX1g004394 | 1:5,472,691-5,474,076 | - | C1H1g28036 | C2H1g27187 | LOC_Os01g11550 | Os01g0213800 | OsPCF5, PCF5, OsTCP1, OsTCP1/PCF5 | Detail |