| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g20383 | 7:5,028,366-5,033,410 | + | C1H7g18406 | CX7g046693 | LOC_Os07g10300 | Os07g0202900 | - | Detail |
| C2H7g11574 | 7:5,053,286-5,072,473 | + | C1H7g03082 | CX7g049668 | LOC_Os07g10350 | Os07g0203300 | - | Detail |
| C2H7g19153 | 7:5,077,532-5,078,185 | + | C1H7g05916 | CX7g048238 | LOC_Os07g10370 | Os07g0203500 | - | Detail |
| C2H7g30071 | 7:5,081,007-5,093,596 | - | C1H7g24934 | CX7g049433 | LOC_Os07g10390 | Os07g0203700 | SPL5, SF3b3 | Detail |
| C2H7g09859 | 7:5,094,752-5,094,955 | - | - | CX7g047095 | - | - | - | Detail |
| C2H7g16846 | 7:5,095,768-5,100,197 | + | C1H7g01063 | CX7g048857 | LOC_Os07g10400 | Os07g0203900 | - | Detail |
| C2H7g21286 | 7:5,106,814-5,107,614 | + | C1H7g29211 | CX7g047692 | LOC_Os07g10410 | Os07g0204000 | - | Detail |
| C2H7g02503 | 7:5,115,295-5,116,853 | + | C1H7g21123 | CX7g046852 | LOC_Os07g10420 | Os07g0204100 | - | Detail |
| C2H7g06849 | 7:5,129,077-5,129,452 | + | C1H7g05822 | CX7g048786 | LOC_Os03g59210 | Os07g0204400 | - | Detail |
| C2H7g01151 | 7:5,130,705-5,135,902 | - | C1H7g29955 | CX7g047483 | LOC_Os07g10460 | Os07g0204500 | - | Detail |
| C2H7g04705 | 7:5,144,545-5,150,137 | + | C1H7g28931 | CX7g048908 | LOC_Os07g10490 | Os07g0204900 | - | Detail |
| C2H7g11636 | 7:5,154,231-5,156,087 | + | C1H7g18363 | CX3g026400 | LOC_Os07g10500 | Os07g0205000 | - | Detail |
| C2H7g00373 | 7:5,160,201-5,168,220 | + | C1H7g20167 | CX7g046689 | LOC_Os07g10520 | Os07g0205200 | - | Detail |
| C2H7g10778 | 7:5,180,492-5,183,783 | + | C1H7g21591 | CX7g047456 | LOC_Os07g10530 | Os07g0205500 | - | Detail |
| C2H7g04993 | 7:5,196,792-5,204,205 | - | C1H7g29675 | CX7g047247 | LOC_Os07g10540 | Os07g0205700 | - | Detail |
| C2H7g19403 | 7:5,207,637-5,215,388 | - | C1H7g07546 | CX7g046496 | LOC_Os07g10550 | Os07g0205900 | - | Detail |
| C2H7g14312 | 7:5,240,273-5,240,743 | + | C1H7g15560 | CX7g047176 | LOC_Os07g10570 | Os07g0206400 | - | Detail |
| C2H7g01106 | 7:5,245,713-5,246,183 | + | C1H7g23358 | CX7g046567 | LOC_Os07g10580 | Os07g0206500 | - | Detail |
| C2H7g17912 | 7:5,250,226-5,252,471 | - | C1H7g24040 | CX7g047137 | LOC_Os07g10590 | Os07g0206600 | OsSTP22 | Detail |
| C2H7g23809 | 7:5,253,511-5,259,326 | - | C1H7g17307 | CX7g046543 | LOC_Os07g10600 | Os07g0206700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004422 | 1:5,259,813-5,263,252 | - | C1H1g22199 | C2H1g00003 | LOC_Os01g11150 | Os01g0209700 | GA2ox7 | Detail |
| CX1g004758 | 1:5,274,970-5,277,044 | - | C1H1g04985 | C2H1g04035 | LOC_Os01g11160 | Os01g0209800 | - | Detail |
| CX1g006209 | 1:5,283,182-5,283,353 | + | - | - | - | - | - | Detail |
| CX1g006771 | 1:5,287,260-5,288,920 | - | C1H1g26396 | C2H1g16459 | LOC_Os01g11200 | Os01g0210200 | - | Detail |
| CX1g001982 | 1:5,290,346-5,291,557 | + | C1H1g27615 | C2H1g10978 | LOC_Os01g11210 | Os01g0210300 | - | Detail |
| CX1g004173 | 1:5,291,834-5,293,957 | - | C1H1g05366 | C2H1g29549 | LOC_Os01g11220 | Os01g0210400 | OsTOD1 | Detail |
| CX1g001527 | 1:5,294,847-5,295,658 | - | C1H1g22960 | C2H1g12111 | LOC_Os01g11230 | Os01g0210500 | - | Detail |
| CX1g004127 | 1:5,298,536-5,299,036 | - | - | C2H1g23743 | LOC_Os01g11240 | Os01g0210600 | - | Detail |
| CX1g003904 | 1:5,303,489-5,305,102 | + | - | - | - | - | - | Detail |
| CX1g004305 | 1:5,306,611-5,306,781 | + | - | - | - | - | - | Detail |
| CX1g000720 | 1:5,308,155-5,310,443 | + | - | - | - | - | - | Detail |
| CX1g002610 | 1:5,309,248-5,313,113 | - | C1H1g12886 | C2H1g05349 | LOC_Os01g11250 | Os01g0210700 | KAT2, OsKAT2 | Detail |
| CX1g004526 | 1:5,316,480-5,320,681 | + | C1H1g30027 | C2H1g07302 | LOC_Os01g11260 | Os01g0210800 | - | Detail |
| CX1g006413 | 1:5,381,547-5,393,635 | + | C1H1g25024 | C2H1g30364 | LOC_Os01g11370 | Os01g0212100 | - | Detail |
| CX1g004990 | 1:5,402,080-5,407,002 | + | C1H1g24516 | C2H1g07400 | LOC_Os01g11414 | Os01g0212400 | - | Detail |
| CX1g007192 | 1:5,407,844-5,409,568 | - | C1H1g10197 | C2H1g07852 | LOC_Os01g11430 | Os01g0212500 | OsTIE1 | Detail |
| CX1g006430 | 1:5,420,747-5,420,992 | - | - | - | - | - | - | Detail |
| CX1g000251 | 1:5,448,257-5,450,074 | + | - | C2H1g03845 | LOC_Os01g11510 | Os01g0213300 | - | Detail |
| CX1g001182 | 1:5,456,522-5,457,226 | - | C1H1g26340 | C2H1g20281 | LOC_Os01g11520 | Os01g0213400 | - | Detail |
| CX1g004394 | 1:5,472,691-5,474,076 | - | C1H1g28036 | C2H1g27187 | LOC_Os01g11550 | Os01g0213800 | OsPCF5, PCF5, OsTCP1, OsTCP1/PCF5 | Detail |