| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H10g31182 | 10:11,210,321-11,213,351 | - | C2H10g24482 | CX10g008995 | LOC_Os10g22720 | Os10g0372700 | - | Detail |
| C1H10g13092 | 10:11,216,281-11,218,058 | - | C2H10g19058 | CX10g008160 | - | Os10g0372500 | - | Detail |
| C1H10g05935 | 10:11,221,102-11,224,040 | - | C2H10g06192 | CX10g009068 | LOC_Os10g22700 | Os10g0372300 | - | Detail |
| C1H10g20012 | 10:11,225,351-11,226,059 | + | C2H10g13146 | CX10g009049 | - | - | - | Detail |
| C1H10g15576 | 10:11,235,940-11,236,351 | + | C2H10g21655 | CX10g009029 | LOC_Os10g22750 | Os10g0373400 | - | Detail |
| C1H10g13394 | 10:11,271,765-11,273,186 | - | C2H10g23552 | CX10g009685 | LOC_Os10g22830 | Os10g0374200 | - | Detail |
| C1H10g30364 | 10:11,285,069-11,287,008 | + | C2H10g20812 | CX10g009301 | LOC_Os11g27380 | Os10g0361300 | - | Detail |
| C1H10g16358 | 10:11,314,438-11,316,251 | - | C2H10g08511 | - | - | Os10g0374450 | - | Detail |
| C1H10g20308 | 10:11,320,430-11,325,769 | + | C2H10g27736 | CX10g007818 | LOC_Os10g22860 | Os10g0374600 | - | Detail |
| C1H10g20238 | 10:11,324,427-11,326,352 | - | C2H10g03820 | - | - | Os10g0374700 | - | Detail |
| C1H10g02469 | 10:11,325,981-11,326,385 | + | C2H10g27736 | - | - | - | - | Detail |
| C1H10g23650 | 10:11,336,122-11,339,333 | + | C2H10g20402 | CX10g008685 | LOC_Os10g22890 | Os10g0375000 | - | Detail |
| C1H10g11579 | 10:11,355,141-11,359,473 | + | C2H10g07426 | CX10g007865 | LOC_Os10g22930 | Os10g0375400 | - | Detail |
| C1H10g17100 | 10:11,373,972-11,381,395 | + | C2H10g27634 | CX10g007853 | LOC_Os10g22950 | Os10g0375600 | SCT2 | Detail |
| C1H10g28145 | 10:11,383,076-11,387,163 | + | C2H10g01808 | CX10g009246 | LOC_Os10g22960 | Os10g0375700 | - | Detail |
| C1H10g11843 | 10:11,413,918-11,415,670 | + | C2H10g12850 | CX10g007643 | LOC_Os10g22980 | Os10g0376200 | - | Detail |
| C1H10g01521 | 10:11,416,573-11,417,109 | + | C2H10g13141 | CX10g007643 | LOC_Os10g22980 | Os10g0376200 | - | Detail |
| C1H10g16390 | 10:11,419,546-11,420,559 | + | C2H10g21847 | - | LOC_Os10g22990 | Os10g0376400 | - | Detail |
| C1H10g05833 | 10:11,445,624-11,447,047 | + | C2H10g01718 | CX10g010017 | LOC_Os10g23050 | Os10g0376900 | - | Detail |
| C1H10g04479 | 10:11,453,020-11,454,520 | + | C2H10g00184 | - | LOC_Os10g23060 | Os10g0377000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004422 | 1:5,259,813-5,263,252 | - | C1H1g22199 | C2H1g00003 | LOC_Os01g11150 | Os01g0209700 | GA2ox7 | Detail |
| CX1g004758 | 1:5,274,970-5,277,044 | - | C1H1g04985 | C2H1g04035 | LOC_Os01g11160 | Os01g0209800 | - | Detail |
| CX1g006209 | 1:5,283,182-5,283,353 | + | - | - | - | - | - | Detail |
| CX1g006771 | 1:5,287,260-5,288,920 | - | C1H1g26396 | C2H1g16459 | LOC_Os01g11200 | Os01g0210200 | - | Detail |
| CX1g001982 | 1:5,290,346-5,291,557 | + | C1H1g27615 | C2H1g10978 | LOC_Os01g11210 | Os01g0210300 | - | Detail |
| CX1g004173 | 1:5,291,834-5,293,957 | - | C1H1g05366 | C2H1g29549 | LOC_Os01g11220 | Os01g0210400 | OsTOD1 | Detail |
| CX1g001527 | 1:5,294,847-5,295,658 | - | C1H1g22960 | C2H1g12111 | LOC_Os01g11230 | Os01g0210500 | - | Detail |
| CX1g004127 | 1:5,298,536-5,299,036 | - | - | C2H1g23743 | LOC_Os01g11240 | Os01g0210600 | - | Detail |
| CX1g003904 | 1:5,303,489-5,305,102 | + | - | - | - | - | - | Detail |
| CX1g004305 | 1:5,306,611-5,306,781 | + | - | - | - | - | - | Detail |
| CX1g000720 | 1:5,308,155-5,310,443 | + | - | - | - | - | - | Detail |
| CX1g002610 | 1:5,309,248-5,313,113 | - | C1H1g12886 | C2H1g05349 | LOC_Os01g11250 | Os01g0210700 | KAT2, OsKAT2 | Detail |
| CX1g004526 | 1:5,316,480-5,320,681 | + | C1H1g30027 | C2H1g07302 | LOC_Os01g11260 | Os01g0210800 | - | Detail |
| CX1g006413 | 1:5,381,547-5,393,635 | + | C1H1g25024 | C2H1g30364 | LOC_Os01g11370 | Os01g0212100 | - | Detail |
| CX1g004990 | 1:5,402,080-5,407,002 | + | C1H1g24516 | C2H1g07400 | LOC_Os01g11414 | Os01g0212400 | - | Detail |
| CX1g007192 | 1:5,407,844-5,409,568 | - | C1H1g10197 | C2H1g07852 | LOC_Os01g11430 | Os01g0212500 | OsTIE1 | Detail |
| CX1g006430 | 1:5,420,747-5,420,992 | - | - | - | - | - | - | Detail |
| CX1g000251 | 1:5,448,257-5,450,074 | + | - | C2H1g03845 | LOC_Os01g11510 | Os01g0213300 | - | Detail |
| CX1g001182 | 1:5,456,522-5,457,226 | - | C1H1g26340 | C2H1g20281 | LOC_Os01g11520 | Os01g0213400 | - | Detail |
| CX1g004394 | 1:5,472,691-5,474,076 | - | C1H1g28036 | C2H1g27187 | LOC_Os01g11550 | Os01g0213800 | OsPCF5, PCF5, OsTCP1, OsTCP1/PCF5 | Detail |