| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H8g18433 | 8:8,873,712-8,877,817 | + | C2H8g23786 | CX8g054333 | LOC_Os08g17784 | Os08g0280100 | - | Detail |
| C1H8g25171 | 8:8,897,849-8,908,213 | + | C2H8g22349 | CX8g050630 | LOC_Os08g17820 | Os08g0280200 | - | Detail |
| C1H8g28950 | 8:8,939,491-8,942,739 | + | C2H8g22652 | CX8g051155 | LOC_Os08g17830 | Os08g0280300 | - | Detail |
| C1H8g25382 | 8:8,946,253-8,953,253 | + | C2H8g26313 | CX8g054713 | LOC_Os08g17870 | Os08g0280600 | - | Detail |
| C1H8g30438 | 8:8,988,912-8,990,264 | + | C2H8g05206 | CX8g052363 | LOC_Os08g17990 | Os08g0281500 | - | Detail |
| C1H8g11582 | 8:8,998,210-9,003,339 | - | C2H8g22935 | CX8g052261 | LOC_Os08g18000 | Os08g0281600 | - | Detail |
| C1H8g30294 | 8:9,006,638-9,014,274 | - | C2H8g20093 | CX8g051927 | LOC_Os08g18044 | Os08g0282000 | - | Detail |
| C1H8g16332 | 8:9,044,759-9,049,851 | + | C2H8g13591 | CX8g053814 | LOC_Os08g18110 | Os08g0282400 | - | Detail |
| C1H8g30958 | 8:9,052,294-9,054,605 | - | C2H8g26930 | CX8g053688 | LOC_Os08g18150 | Os08g0282500 | - | Detail |
| C1H8g12234 | 8:9,102,929-9,105,545 | + | C2H8g09839 | CX8g052563 | LOC_Os08g18880 | Os08g0285200 | - | Detail |
| C1H8g06704 | 8:9,131,715-9,132,326 | + | C2H8g19786 | - | - | - | - | Detail |
| C1H8g06686 | 8:9,142,407-9,144,068 | - | - | CX8g050514 | - | - | - | Detail |
| C1H8g14302 | 8:9,147,658-9,151,293 | - | C2H8g21801 | CX8g052780 | LOC_Os08g18920 | Os08g0285600 | - | Detail |
| C1H8g07676 | 8:9,166,896-9,167,275 | - | - | CX8g054029 | - | - | - | Detail |
| C1H8g22822 | 8:9,176,764-9,178,022 | + | C2H8g23785 | CX8g054332 | LOC_Os08g18970 | Os08g0286100 | OsPLL11 | Detail |
| C1H8g05979 | 8:9,331,308-9,342,623 | - | C2H8g24438 | CX8g052294 | LOC_Os08g19140 | Os08g0288200 | - | Detail |
| C1H8g12206 | 8:9,353,620-9,358,956 | - | C2H8g10927 | CX8g053120 | LOC_Os08g19170 | Os08g0288500 | - | Detail |
| C1H8g29326 | 8:9,371,561-9,375,186 | + | C2H8g17699 | CX8g054421 | LOC_Os08g19210 | Os08g0289000 | - | Detail |
| C1H8g17324 | 8:9,380,897-9,384,175 | + | C2H8g08392 | - | LOC_Os03g04150 | - | - | Detail |
| C1H8g20837 | 8:9,405,660-9,408,925 | - | C2H8g14382 | CX8g051368 | LOC_Os08g19270 | Os08g0289400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004422 | 1:5,259,813-5,263,252 | - | C1H1g22199 | C2H1g00003 | LOC_Os01g11150 | Os01g0209700 | GA2ox7 | Detail |
| CX1g004758 | 1:5,274,970-5,277,044 | - | C1H1g04985 | C2H1g04035 | LOC_Os01g11160 | Os01g0209800 | - | Detail |
| CX1g006209 | 1:5,283,182-5,283,353 | + | - | - | - | - | - | Detail |
| CX1g006771 | 1:5,287,260-5,288,920 | - | C1H1g26396 | C2H1g16459 | LOC_Os01g11200 | Os01g0210200 | - | Detail |
| CX1g001982 | 1:5,290,346-5,291,557 | + | C1H1g27615 | C2H1g10978 | LOC_Os01g11210 | Os01g0210300 | - | Detail |
| CX1g004173 | 1:5,291,834-5,293,957 | - | C1H1g05366 | C2H1g29549 | LOC_Os01g11220 | Os01g0210400 | OsTOD1 | Detail |
| CX1g001527 | 1:5,294,847-5,295,658 | - | C1H1g22960 | C2H1g12111 | LOC_Os01g11230 | Os01g0210500 | - | Detail |
| CX1g004127 | 1:5,298,536-5,299,036 | - | - | C2H1g23743 | LOC_Os01g11240 | Os01g0210600 | - | Detail |
| CX1g003904 | 1:5,303,489-5,305,102 | + | - | - | - | - | - | Detail |
| CX1g004305 | 1:5,306,611-5,306,781 | + | - | - | - | - | - | Detail |
| CX1g000720 | 1:5,308,155-5,310,443 | + | - | - | - | - | - | Detail |
| CX1g002610 | 1:5,309,248-5,313,113 | - | C1H1g12886 | C2H1g05349 | LOC_Os01g11250 | Os01g0210700 | KAT2, OsKAT2 | Detail |
| CX1g004526 | 1:5,316,480-5,320,681 | + | C1H1g30027 | C2H1g07302 | LOC_Os01g11260 | Os01g0210800 | - | Detail |
| CX1g006413 | 1:5,381,547-5,393,635 | + | C1H1g25024 | C2H1g30364 | LOC_Os01g11370 | Os01g0212100 | - | Detail |
| CX1g004990 | 1:5,402,080-5,407,002 | + | C1H1g24516 | C2H1g07400 | LOC_Os01g11414 | Os01g0212400 | - | Detail |
| CX1g007192 | 1:5,407,844-5,409,568 | - | C1H1g10197 | C2H1g07852 | LOC_Os01g11430 | Os01g0212500 | OsTIE1 | Detail |
| CX1g006430 | 1:5,420,747-5,420,992 | - | - | - | - | - | - | Detail |
| CX1g000251 | 1:5,448,257-5,450,074 | + | - | C2H1g03845 | LOC_Os01g11510 | Os01g0213300 | - | Detail |
| CX1g001182 | 1:5,456,522-5,457,226 | - | C1H1g26340 | C2H1g20281 | LOC_Os01g11520 | Os01g0213400 | - | Detail |
| CX1g004394 | 1:5,472,691-5,474,076 | - | C1H1g28036 | C2H1g27187 | LOC_Os01g11550 | Os01g0213800 | OsPCF5, PCF5, OsTCP1, OsTCP1/PCF5 | Detail |