| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15942 | 5:14,806,407-14,808,137 | + | C2H5g14904 | CX5g038438 | LOC_Os05g31420 | Os05g0378500 | Gnd5 | Detail |
| C1H5g26766 | 5:14,841,025-14,841,713 | - | C2H5g05514 | CX5g037505 | LOC_Os05g31470 | - | - | Detail |
| C1H5g21416 | 5:14,847,264-14,852,436 | - | C2H5g07919 | CX5g040361 | LOC_Os05g31480 | Os05g0378800 | - | Detail |
| C1H5g03148 | 5:14,853,191-14,857,977 | - | C2H5g27417 | CX5g038969 | LOC_Os05g31490 | Os05g0378900 | - | Detail |
| C1H5g12936 | 5:14,863,567-14,866,978 | - | - | - | LOC_Os05g31520 | - | - | Detail |
| C1H5g20720 | 5:14,867,847-14,869,818 | - | C2H5g25052 | - | - | - | - | Detail |
| C1H5g28359 | 5:14,872,112-14,881,346 | + | C2H5g19061 | CX5g039321 | LOC_Os05g31530 | Os05g0379500 | - | Detail |
| C1H5g13126 | 5:14,882,877-14,883,458 | - | - | - | - | - | - | Detail |
| C1H5g09848 | 5:14,883,520-14,884,320 | - | - | - | - | - | - | Detail |
| C1H5g28629 | 5:14,884,371-14,884,991 | - | - | - | - | - | - | Detail |
| C1H5g31239 | 5:14,885,493-14,887,155 | - | - | - | - | Os05g0380850 | - | Detail |
| C1H5g05054 | 5:14,891,582-14,892,178 | - | C2H5g18251 | CX5g037649 | LOC_Os05g31620 | Os05g0380900 | - | Detail |
| C1H5g03678 | 5:14,909,056-14,909,574 | - | C2H5g02851 | CX5g036933 | LOC_Os05g31670 | Os05g0381400 | AWPM-19, PM19, OsPM1, OsPM19L1 | Detail |
| C1H5g22192 | 5:14,912,709-14,916,753 | + | C2H5g00812 | CX5g040874 | LOC_Os05g31680 | Os05g0381500 | - | Detail |
| C1H5g26855 | 5:14,928,977-14,932,252 | + | - | CX5g041023 | LOC_Os05g31690 | Os05g0381700 | - | Detail |
| C1H5g18693 | 5:14,960,958-14,963,095 | + | C2H5g07422 | CX5g038575 | LOC_Os05g31710 | Os05g0381900 | - | Detail |
| C1H5g25084 | 5:14,975,576-14,978,892 | + | C2H5g04833 | CX5g040022 | LOC_Os05g31720 | Os05g0382000 | - | Detail |
| C1H5g14307 | 5:14,983,196-14,987,606 | - | C2H5g08328 | CX5g037534 | LOC_Os05g31730 | Os05g0382200 | - | Detail |
| C1H5g04280 | 5:14,993,709-14,995,280 | + | C2H5g19880 | CX5g036798 | LOC_Os05g31740 | Os05g0382500 | CYP94E3, OsCYP94E3 | Detail |
| C1H5g01406 | 5:15,003,520-15,005,185 | - | C2H5g19685 | CX5g040387 | LOC_Os05g31750 | Os05g0382600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g012271 | 11:1,049,251-1,050,639 | + | C1H11g13160 | C2H11g21206 | LOC_Os11g03370 | Os11g0127600 | ONAC045 | Detail |
| CX11g013969 | 11:1,054,533-1,058,595 | - | C1H11g20569 | C2H11g05926 | LOC_Os11g03380 | Os11g0127700 | - | Detail |
| CX11g011264 | 11:1,059,717-1,061,164 | + | C1H11g25314 | C2H11g13818 | LOC_Os11g03390 | Os11g0127800 | - | Detail |
| CX11g012049 | 11:1,064,406-1,064,855 | - | C1H11g11442 | - | LOC_Os11g03400 | Os11g0127900 | - | Detail |
| CX11g011648 | 11:1,065,096-1,065,344 | + | - | - | - | Os11g0127951 | - | Detail |
| CX11g012377 | 11:1,067,598-1,070,253 | - | C1H11g08781 | C2H11g29218 | LOC_Os11g03410 | Os11g0128000 | - | Detail |
| CX11g011845 | 11:1,075,983-1,076,300 | + | C1H11g12536 | C2H11g07210 | LOC_Os11g03420 | Os11g0128300 | MIF1 | Detail |
| CX11g012031 | 11:1,084,750-1,086,564 | + | C1H11g15750 | C2H12g03001 | LOC_Os11g03430 | Os11g0128400 | - | Detail |
| CX11g012035 | 11:1,096,666-1,097,695 | - | C1H11g25804 | C2H11g15695 | LOC_Os11g03440 | Os11g0128500 | - | Detail |
| CX11g013396 | 11:1,103,065-1,103,523 | + | - | - | LOC_Os11g03450 | Os11g0128600 | - | Detail |
| CX11g013502 | 11:1,104,528-1,107,520 | - | C1H11g15815 | C2H11g22631 | LOC_Os11g03460 | Os11g0128700 | - | Detail |
| CX11g011832 | 11:1,111,133-1,114,694 | - | C1H11g23777 | C2H11g26844 | LOC_Os11g03470 | Os11g0128800 | - | Detail |
| CX11g011045 | 11:1,117,616-1,121,198 | - | C1H11g10713 | C2H11g08932 | LOC_Os11g03240 | Os11g0129000 | - | Detail |
| CX11g012212 | 11:1,125,140-1,128,510 | - | C1H11g31319 | C2H11g18994 | LOC_Os11g03240 | Os11g0129000 | - | Detail |
| CX11g010924 | 11:1,136,786-1,141,103 | - | C1H11g14293 | C2H11g02953 | LOC_Os11g03500 | Os11g0129000 | - | Detail |
| CX11g014752 | 11:1,147,134-1,148,372 | - | C1H11g28880 | C2H11g08401 | LOC_Os11g03520 | Os11g0129500 | OsGELP110 | Detail |
| CX11g014479 | 11:1,149,380-1,151,736 | + | C1H11g05449 | C2H11g05867 | LOC_Os11g03530 | Os11g0129600 | - | Detail |
| CX11g011156 | 11:1,152,534-1,157,519 | - | C1H11g02181 | C2H11g26262 | LOC_Os11g03540 | Os12g0126300 | OsWRI1-2 | Detail |
| CX11g014117 | 11:1,172,012-1,174,995 | - | C1H12g15178 | C2H11g10212 | LOC_Os11g03550 | Os11g0129800 | - | Detail |
| CX11g011820 | 11:1,183,111-1,190,553 | - | C1H11g12181 | C2H11g15628 | LOC_Os11g03570 | Os11g0130100 | - | Detail |