| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g03562 | 4:12,928,133-12,928,405 | + | C2H4g20021 | - | - | Os04g0341100 | - | Detail |
| C1H4g19050 | 4:12,935,121-12,944,840 | - | C2H4g09454 | CX4g033674 | LOC_Os04g27340 | Os04g0340300 | OsTPS19 | Detail |
| C1H4g20792 | 4:12,968,531-12,971,065 | - | C2H4g13731 | CX4g034457 | LOC_Os04g27470 | Os04g0345400 | - | Detail |
| C1H4g05931 | 4:12,985,331-12,987,899 | - | C2H4g30131 | CX4g033401 | LOC_Os04g27430 | Os04g0342100 | OsSTPS2 | Detail |
| C1H4g04953 | 4:12,990,304-12,993,326 | - | C2H4g30131 | CX4g035836 | LOC_Os04g27430 | Os04g0342100 | OsSTPS2 | Detail |
| C1H4g10592 | 4:13,031,164-13,036,953 | - | C2H4g01920 | CX4g034334 | LOC_Os04g27540 | Os04g0345400 | - | Detail |
| C1H4g14729 | 4:13,081,514-13,083,682 | - | C2H4g22506 | CX4g034494 | LOC_Os04g27720 | Os04g0344100 | - | Detail |
| C1H4g01231 | 4:13,112,594-13,112,908 | - | C2H4g16931 | - | - | - | - | Detail |
| C1H4g17656 | 4:13,115,785-13,119,290 | - | C2H4g16931 | CX4g033401 | LOC_Os04g27790 | Os04g0345400 | - | Detail |
| C1H4g17126 | 4:13,128,022-13,130,078 | + | C2H4g12683 | CX4g036139 | LOC_Os11g08800 | - | - | Detail |
| C1H4g21918 | 4:13,135,371-13,139,973 | + | C2H4g23322 | CX4g036067 | LOC_Os04g27790 | Os04g0345400 | - | Detail |
| C1H4g23107 | 4:13,141,340-13,144,568 | - | - | CX4g033963 | - | - | - | Detail |
| C1H4g22755 | 4:13,144,706-13,146,638 | - | C2H4g27481 | - | - | - | - | Detail |
| C1H4g11276 | 4:13,155,482-13,159,609 | + | C2H4g05861 | CX4g034459 | LOC_Os04g27830 | Os04g0345800 | - | Detail |
| C1H4g11725 | 4:13,164,153-13,171,655 | + | C2H4g12493 | CX4g034468 | LOC_Os04g27850 | Os04g0346000 | - | Detail |
| C1H4g07589 | 4:13,176,401-13,176,930 | - | C2H4g15688 | CX4g032851 | - | - | - | Detail |
| C1H4g08073 | 4:13,180,391-13,181,755 | + | C2H4g22024 | CX4g034059 | LOC_Os04g27860 | Os04g0346100 | - | Detail |
| C1H4g22890 | 4:13,188,872-13,190,869 | + | C2H4g10199 | CX4g036065 | - | Os04g0346800 | - | Detail |
| C1H4g23098 | 4:13,198,680-13,202,442 | - | C2H4g07726 | CX4g036207 | LOC_Os04g27960 | Os04g0346900 | - | Detail |
| C1H4g05778 | 4:13,207,788-13,209,105 | - | C2H4g06173 | CX4g036626 | LOC_Os04g27980 | Os04g0347200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g013052 | 11:198,060-200,413 | + | C1H11g15479 | C2H11g11172 | LOC_Os11g01240 | Os11g0103400 | - | Detail |
| CX11g012146 | 11:206,985-211,363 | - | C1H11g29788 | C2H11g08907 | LOC_Os11g01270 | Os11g0103700 | - | Detail |
| CX11g014836 | 11:217,035-221,037 | + | C1H11g28012 | C2H11g08625 | LOC_Os11g01280 | Os11g0103800 | - | Detail |
| CX11g013786 | 11:223,244-223,567 | - | C1H11g07090 | - | LOC_Os11g01300 | Os11g0104050 | - | Detail |
| CX11g014082 | 11:226,837-232,752 | + | C1H11g15195 | C2H11g06934 | LOC_Os11g01320 | Os11g0104220 | - | Detail |
| CX11g011532 | 11:245,929-250,598 | + | C1H11g27974 | C2H11g22963 | LOC_Os11g01330 | Os11g0104300 | D53, D53(D K3), DK3, Dwf34 | Detail |
| CX11g012466 | 11:251,733-254,981 | - | C1H11g18136 | C2H11g10988 | LOC_Os11g01340 | Os11g0104400 | OsFAD3 | Detail |
| CX11g012774 | 11:269,470-269,706 | + | C1H11g08495 | - | - | - | - | Detail |
| CX11g013324 | 11:270,153-271,505 | - | - | - | - | - | - | Detail |
| CX11g011321 | 11:272,047-273,312 | - | C1H11g30668 | C2H11g22927 | LOC_Os03g07320 | - | - | Detail |
| CX11g014042 | 11:277,563-282,621 | + | C1H11g22021 | C2H11g10211 | LOC_Os11g01370 | Os11g0104800 | - | Detail |
| CX11g011359 | 11:285,352-295,031 | + | C1H11g23052 | C2H11g22983 | LOC_Os11g01380 | Os11g0104900 | OsCHC1 | Detail |
| CX11g014863 | 11:296,305-296,763 | - | C1H11g19311 | C2H11g29167 | LOC_Os11g01390 | Os11g0105000 | - | Detail |
| CX11g013019 | 11:305,771-308,554 | + | C1H11g12710 | C2H11g09776 | LOC_Os11g01400 | - | - | Detail |
| CX11g014955 | 11:308,995-310,359 | - | - | - | LOC_Os11g01410 | - | - | Detail |
| CX11g013375 | 11:311,382-313,359 | - | C1H11g02260 | C2H11g28138 | LOC_Os11g01420 | Os11g0105400 | - | Detail |
| CX11g011523 | 11:314,640-318,719 | - | C1H11g27508 | C2H11g16414 | LOC_Os11g01439 | Os11g0105750 | - | Detail |
| CX11g011067 | 11:319,714-321,285 | - | C1H11g12173 | C2H11g04672 | LOC_Os11g01450 | Os11g0105800 | - | Detail |
| CX11g013439 | 11:326,868-328,506 | - | C1H12g29981 | C2H12g08640 | LOC_Os11g01480 | Os11g0106100 | - | Detail |
| CX11g011840 | 11:332,359-335,188 | - | C1H11g18875 | C2H11g11145 | LOC_Os11g01490 | Os11g0106200 | - | Detail |