| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g09189 | 3:33,002,790-33,008,902 | + | C2H3g14850 | CX3g027621 | LOC_Os03g62750 | Os03g0844700 | - | Detail |
| C1H3g04796 | 3:33,012,472-33,015,587 | - | C2H3g09934 | CX3g027114 | LOC_Os03g62780 | Os03g0844900 | - | Detail |
| C1H3g08823 | 3:33,016,070-33,017,510 | - | C2H3g04637 | CX3g027041 | LOC_Os03g62790 | Os03g0845000 | - | Detail |
| C1H3g29234 | 3:33,018,831-33,022,598 | - | C2H3g26108 | CX3g030975 | LOC_Os03g62830 | Os03g0845300 | - | Detail |
| C1H3g31847 | 3:33,023,412-33,023,972 | + | C2H3g24255 | CX3g025947 | LOC_Os03g62840 | - | - | Detail |
| C1H3g01054 | 3:33,024,826-33,033,780 | - | C2H3g26469 | CX3g027086 | LOC_Os03g62850 | Os03g0845500 | - | Detail |
| C1H3g13526 | 3:33,034,511-33,036,781 | - | C2H3g09183 | CX3g030387 | LOC_Os03g62860 | Os03g0845600 | - | Detail |
| C1H3g30582 | 3:33,037,842-33,039,542 | - | C2H3g07934 | CX3g028167 | LOC_Os03g62870 | Os03g0845700 | - | Detail |
| C1H3g07662 | 3:33,042,978-33,047,946 | + | C2H3g13863 | CX3g025569 | LOC_Os03g63020 | Os03g0847600 | - | Detail |
| C1H3g18227 | 3:33,056,349-33,061,777 | + | C2H3g03465 | CX3g030304 | LOC_Os03g63040 | Os03g0847800 | - | Detail |
| C1H3g18477 | 3:33,068,587-33,069,191 | + | C2H3g04348 | CX3g027249 | LOC_Os03g63060 | Os03g0847900 | - | Detail |
| C1H3g04389 | 3:33,071,711-33,075,041 | - | C2H3g21474 | CX3g030785 | LOC_Os03g63074 | Os03g0848100 | - | Detail |
| C1H3g15296 | 3:33,075,988-33,078,517 | - | C2H3g05478 | CX3g028645 | LOC_Os03g63074 | Os03g0848200 | OsPHY1 | Detail |
| C1H3g03652 | 3:33,080,148-33,083,172 | + | C2H3g28774 | CX3g026033 | LOC_Os03g63090 | Os03g0848300 | - | Detail |
| C1H3g28105 | 3:33,084,108-33,087,157 | - | C2H3g19380 | CX3g025110 | LOC_Os03g63110 | Os03g0848400 | - | Detail |
| C1H3g31410 | 3:33,089,112-33,091,789 | + | C2H3g29526 | CX3g025723 | LOC_Os03g63140 | Os03g0848600 | - | Detail |
| C1H3g23775 | 3:33,093,392-33,099,498 | - | C2H3g03590 | CX3g030365 | LOC_Os03g63240 | Os03g0849500 | - | Detail |
| C1H3g19612 | 3:33,101,925-33,107,579 | - | C2H3g13329 | CX3g026100 | LOC_Os03g63250 | Os03g0849600 | - | Detail |
| C1H3g10745 | 3:33,110,854-33,112,905 | + | C2H3g05145 | CX3g026065 | LOC_Os03g63260 | Os03g0849700 | - | Detail |
| C1H3g31123 | 3:33,110,962-33,111,215 | - | - | - | - | Os03g0849750 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g013052 | 11:198,060-200,413 | + | C1H11g15479 | C2H11g11172 | LOC_Os11g01240 | Os11g0103400 | - | Detail |
| CX11g012146 | 11:206,985-211,363 | - | C1H11g29788 | C2H11g08907 | LOC_Os11g01270 | Os11g0103700 | - | Detail |
| CX11g014836 | 11:217,035-221,037 | + | C1H11g28012 | C2H11g08625 | LOC_Os11g01280 | Os11g0103800 | - | Detail |
| CX11g013786 | 11:223,244-223,567 | - | C1H11g07090 | - | LOC_Os11g01300 | Os11g0104050 | - | Detail |
| CX11g014082 | 11:226,837-232,752 | + | C1H11g15195 | C2H11g06934 | LOC_Os11g01320 | Os11g0104220 | - | Detail |
| CX11g011532 | 11:245,929-250,598 | + | C1H11g27974 | C2H11g22963 | LOC_Os11g01330 | Os11g0104300 | D53, D53(D K3), DK3, Dwf34 | Detail |
| CX11g012466 | 11:251,733-254,981 | - | C1H11g18136 | C2H11g10988 | LOC_Os11g01340 | Os11g0104400 | OsFAD3 | Detail |
| CX11g012774 | 11:269,470-269,706 | + | C1H11g08495 | - | - | - | - | Detail |
| CX11g013324 | 11:270,153-271,505 | - | - | - | - | - | - | Detail |
| CX11g011321 | 11:272,047-273,312 | - | C1H11g30668 | C2H11g22927 | LOC_Os03g07320 | - | - | Detail |
| CX11g014042 | 11:277,563-282,621 | + | C1H11g22021 | C2H11g10211 | LOC_Os11g01370 | Os11g0104800 | - | Detail |
| CX11g011359 | 11:285,352-295,031 | + | C1H11g23052 | C2H11g22983 | LOC_Os11g01380 | Os11g0104900 | OsCHC1 | Detail |
| CX11g014863 | 11:296,305-296,763 | - | C1H11g19311 | C2H11g29167 | LOC_Os11g01390 | Os11g0105000 | - | Detail |
| CX11g013019 | 11:305,771-308,554 | + | C1H11g12710 | C2H11g09776 | LOC_Os11g01400 | - | - | Detail |
| CX11g014955 | 11:308,995-310,359 | - | - | - | LOC_Os11g01410 | - | - | Detail |
| CX11g013375 | 11:311,382-313,359 | - | C1H11g02260 | C2H11g28138 | LOC_Os11g01420 | Os11g0105400 | - | Detail |
| CX11g011523 | 11:314,640-318,719 | - | C1H11g27508 | C2H11g16414 | LOC_Os11g01439 | Os11g0105750 | - | Detail |
| CX11g011067 | 11:319,714-321,285 | - | C1H11g12173 | C2H11g04672 | LOC_Os11g01450 | Os11g0105800 | - | Detail |
| CX11g013439 | 11:326,868-328,506 | - | C1H12g29981 | C2H12g08640 | LOC_Os11g01480 | Os11g0106100 | - | Detail |
| CX11g011840 | 11:332,359-335,188 | - | C1H11g18875 | C2H11g11145 | LOC_Os11g01490 | Os11g0106200 | - | Detail |