| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g23460 | 6:10,158,677-10,159,365 | + | C1H6g06056 | CX6g044894 | - | Os06g0316950 | - | Detail |
| C2H6g29048 | 6:10,162,508-10,163,388 | - | C1H6g25626 | CX6g042665 | - | - | - | Detail |
| C2H6g09461 | 6:10,164,014-10,164,559 | - | - | CX6g045107 | - | - | - | Detail |
| C2H6g18604 | 6:10,167,979-10,169,161 | + | C1H6g09647 | CX6g044894 | LOC_Os06g21240 | Os06g0317200 | - | Detail |
| C2H6g21088 | 6:10,186,509-10,186,850 | + | C1H6g25604 | - | - | - | - | Detail |
| C2H6g24536 | 6:10,191,494-10,191,871 | + | C1H6g13835 | - | - | - | - | Detail |
| C2H6g22946 | 6:10,206,143-10,206,691 | + | C1H6g02304 | CX6g041700 | LOC_Os06g21330 | Os06g0318200 | - | Detail |
| C2H6g06961 | 6:10,207,641-10,208,888 | + | C1H6g29323 | CX6g041700 | LOC_Os06g21330 | Os06g0318200 | - | Detail |
| C2H6g04069 | 6:10,210,934-10,213,723 | - | C1H6g20482 | CX6g041422 | - | Os06g0318300 | - | Detail |
| C2H6g06294 | 6:10,219,481-10,224,201 | + | C1H6g31652 | CX6g041234 | LOC_Os06g21360 | Os06g0318500 | - | Detail |
| C2H6g16674 | 6:10,235,273-10,239,113 | + | C1H6g10203 | CX6g044274 | LOC_Os06g21380 | Os06g0318600 | - | Detail |
| C2H6g23908 | 6:10,242,154-10,247,931 | + | C1H6g17249 | CX6g041922 | LOC_Os06g21390 | Os06g0318700 | MKRN, OsSIRP3 | Detail |
| C2H6g29333 | 6:10,259,198-10,263,102 | - | C1H6g24512 | - | - | Os06g0319366 | - | Detail |
| C2H6g12588 | 6:10,259,274-10,260,473 | + | - | - | LOC_Os06g21410 | Os06g0319133 | OSJAGP | Detail |
| C2H6g05819 | 6:10,264,575-10,270,453 | + | C1H6g15030 | CX6g043466 | LOC_Os06g21470 | Os06g0319600 | - | Detail |
| C2H6g22687 | 6:10,315,046-10,317,750 | + | C1H6g23192 | CX6g044246 | LOC_Os06g21480 | Os06g0319700 | - | Detail |
| C2H6g04460 | 6:10,318,412-10,319,074 | - | - | CX6g044564 | LOC_Os06g21530 | Os06g0319800 | - | Detail |
| C2H6g30426 | 6:10,323,736-10,324,252 | - | C1H6g14935 | CX6g045633 | LOC_Os06g21550 | Os06g0320000 | - | Detail |
| C2H6g00743 | 6:10,325,794-10,329,181 | + | C1H6g07888 | CX6g044452 | LOC_Os06g21560 | Os06g0320100 | - | Detail |
| C2H6g13117 | 6:10,329,576-10,334,164 | - | C1H6g15151 | CX6g043671 | LOC_Os06g21570 | Os06g0320200 | Os6BGlu24 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g012572 | 11:46,880-57,584 | - | C1H11g02445 | C2H11g12780 | - | - | - | Detail |
| CX11g013929 | 11:58,886-60,387 | - | C1H11g11120 | C2H12g28928 | LOC_Os11g01010 | Os11g0100100 | - | Detail |
| CX11g013663 | 11:60,512-63,042 | + | C1H11g00730 | C2H11g22941 | LOC_Os11g01020 | Os11g0100200 | - | Detail |
| CX11g012133 | 11:63,431-66,403 | - | C1H11g05406 | C2H11g24348 | LOC_Os11g01030 | Os11g0100300 | - | Detail |
| CX11g011920 | 11:70,790-72,075 | - | C1H11g01849 | C2H11g05219 | LOC_Os11g01040 | Os11g0100600 | - | Detail |
| CX11g013460 | 11:73,812-75,536 | - | C1H11g20414 | C2H11g01700 | - | - | - | Detail |
| CX11g014603 | 11:84,075-85,553 | - | C1H11g25936 | C2H11g26787 | LOC_Os11g01050 | Os11g0100800 | - | Detail |
| CX11g011380 | 11:89,322-96,493 | + | C1H11g21634 | C2H11g04368 | LOC_Os11g01074 | Os11g0101200 | OsRpp30 | Detail |
| CX11g010871 | 11:124,843-125,454 | + | C1H11g18239 | C2H11g29422 | LOC_Os11g01130 | Os11g0102100 | WOX3, OsWOX3, OsNS, OsPRS | Detail |
| CX11g012493 | 11:138,868-139,032 | + | - | - | - | - | - | Detail |
| CX11g013891 | 11:141,136-150,445 | + | C1H11g15262 | C2H11g14954 | LOC_Os11g01140 | Os11g0102200 | OsPHOT1a | Detail |
| CX11g011791 | 11:151,102-152,513 | - | C1H11g26777 | C2H11g23847 | - | - | - | Detail |
| CX11g011515 | 11:160,013-162,906 | + | C1H11g29895 | C2H11g08338 | LOC_Os11g01170 | Os11g0102600 | - | Detail |
| CX11g014260 | 11:164,299-165,279 | - | C1H11g00951 | C2H11g20080 | LOC_Os11g02540 | Os11g0117600 | OsWRKY50 | Detail |
| CX11g014575 | 11:166,521-167,258 | - | C1H11g00951 | C2H11g20080 | LOC_Os11g01180 | Os11g0102700 | - | Detail |
| CX11g011926 | 11:170,280-176,291 | + | C1H11g19879 | C2H11g17658 | LOC_Os12g01190 | Os11g0102800 | OsRINGC2-1 | Detail |
| CX11g014886 | 11:177,455-184,182 | - | C1H11g30247 | C2H11g14803 | LOC_Os11g01200 | Os11g0102900 | - | Detail |
| CX11g012816 | 11:184,907-185,056 | + | - | - | - | - | - | Detail |
| CX11g013479 | 11:190,465-192,585 | + | C1H11g18930 | C2H12g00217 | LOC_Os11g01210 | Os11g0103000 | - | Detail |
| CX11g014869 | 11:193,003-197,282 | - | C1H11g15396 | C2H11g28258 | LOC_Os11g01220 | Os11g0103100 | - | Detail |