| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g23944 | 4:16,948,562-16,950,526 | + | C2H4g00787 | CX4g031977 | LOC_Os04g32580 | Os04g0397400 | - | Detail |
| C1H4g13851 | 4:16,951,185-16,953,815 | - | C2H4g00959 | CX4g033053 | LOC_Os04g32590 | Os04g0397500 | - | Detail |
| C1H4g24982 | 4:16,962,428-16,964,379 | + | C2H4g24848 | - | LOC_Os04g32600 | Os04g0397700 | - | Detail |
| C1H4g01528 | 4:16,979,852-16,982,078 | + | C2H4g18306 | CX4g032640 | LOC_Os04g32620 | Os04g0398000 | - | Detail |
| C1H4g13821 | 4:17,005,481-17,010,588 | + | C2H4g26614 | CX4g036075 | LOC_Os04g32650 | Os04g0398300 | OsGlyRS1 | Detail |
| C1H4g05012 | 4:17,011,224-17,013,460 | + | C2H4g16415 | CX4g032937 | LOC_Os04g32660 | Os04g0398500 | - | Detail |
| C1H4g28546 | 4:17,016,233-17,019,038 | + | C2H4g00377 | CX4g033047 | LOC_Os04g32670 | Os04g0398600 | - | Detail |
| C1H4g21316 | 4:17,019,324-17,020,013 | - | C2H4g14149 | CX4g032973 | LOC_Os04g32680 | Os04g0398700 | - | Detail |
| C1H4g20511 | 4:17,021,362-17,035,943 | - | C2H4g19288 | CX4g032900 | LOC_Os04g32690 | Os04g0398800 | - | Detail |
| C1H4g07845 | 4:17,039,341-17,040,395 | + | C2H4g10637 | CX4g032898 | LOC_Os04g32710 | Os04g0399000 | - | Detail |
| C1H4g26028 | 4:17,048,817-17,052,140 | + | C2H4g00186 | CX4g035881 | LOC_Os04g32740 | Os04g0399300 | - | Detail |
| C1H4g21348 | 4:17,081,537-17,084,399 | - | C2H4g03270 | - | LOC_Os04g32800 | Os04g0400000 | - | Detail |
| C1H4g06656 | 4:17,085,121-17,085,886 | - | C2H4g06368 | - | - | Os04g0400000 | - | Detail |
| C1H4g27942 | 4:17,087,688-17,089,136 | - | C2H4g21932 | - | - | Os04g0572100 | - | Detail |
| C1H4g05223 | 4:17,114,709-17,116,191 | - | C2H4g02618 | - | LOC_Os04g32810 | Os04g0400000 | - | Detail |
| C1H4g21891 | 4:17,121,377-17,122,290 | - | C2H4g22891 | - | LOC_Os04g32820 | Os04g0400700 | - | Detail |
| C1H4g02047 | 4:17,123,933-17,124,754 | - | C2H4g07833 | - | LOC_Os04g32830 | Os04g0400700 | - | Detail |
| C1H4g29317 | 4:17,128,693-17,129,760 | - | C2H4g00763 | - | LOC_Os04g32840 | Os04g0400800 | - | Detail |
| C1H4g17092 | 4:17,135,472-17,137,245 | - | C2H4g16334 | - | LOC_Os04g32850 | Os04g0401000 | - | Detail |
| C1H4g28791 | 4:17,143,681-17,144,321 | - | C2H4g26185 | - | LOC_Os04g32860 | Os04g0401100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g012572 | 11:46,880-57,584 | - | C1H11g02445 | C2H11g12780 | - | - | - | Detail |
| CX11g013929 | 11:58,886-60,387 | - | C1H11g11120 | C2H12g28928 | LOC_Os11g01010 | Os11g0100100 | - | Detail |
| CX11g013663 | 11:60,512-63,042 | + | C1H11g00730 | C2H11g22941 | LOC_Os11g01020 | Os11g0100200 | - | Detail |
| CX11g012133 | 11:63,431-66,403 | - | C1H11g05406 | C2H11g24348 | LOC_Os11g01030 | Os11g0100300 | - | Detail |
| CX11g011920 | 11:70,790-72,075 | - | C1H11g01849 | C2H11g05219 | LOC_Os11g01040 | Os11g0100600 | - | Detail |
| CX11g013460 | 11:73,812-75,536 | - | C1H11g20414 | C2H11g01700 | - | - | - | Detail |
| CX11g014603 | 11:84,075-85,553 | - | C1H11g25936 | C2H11g26787 | LOC_Os11g01050 | Os11g0100800 | - | Detail |
| CX11g011380 | 11:89,322-96,493 | + | C1H11g21634 | C2H11g04368 | LOC_Os11g01074 | Os11g0101200 | OsRpp30 | Detail |
| CX11g010871 | 11:124,843-125,454 | + | C1H11g18239 | C2H11g29422 | LOC_Os11g01130 | Os11g0102100 | WOX3, OsWOX3, OsNS, OsPRS | Detail |
| CX11g012493 | 11:138,868-139,032 | + | - | - | - | - | - | Detail |
| CX11g013891 | 11:141,136-150,445 | + | C1H11g15262 | C2H11g14954 | LOC_Os11g01140 | Os11g0102200 | OsPHOT1a | Detail |
| CX11g011791 | 11:151,102-152,513 | - | C1H11g26777 | C2H11g23847 | - | - | - | Detail |
| CX11g011515 | 11:160,013-162,906 | + | C1H11g29895 | C2H11g08338 | LOC_Os11g01170 | Os11g0102600 | - | Detail |
| CX11g014260 | 11:164,299-165,279 | - | C1H11g00951 | C2H11g20080 | LOC_Os11g02540 | Os11g0117600 | OsWRKY50 | Detail |
| CX11g014575 | 11:166,521-167,258 | - | C1H11g00951 | C2H11g20080 | LOC_Os11g01180 | Os11g0102700 | - | Detail |
| CX11g011926 | 11:170,280-176,291 | + | C1H11g19879 | C2H11g17658 | LOC_Os12g01190 | Os11g0102800 | OsRINGC2-1 | Detail |
| CX11g014886 | 11:177,455-184,182 | - | C1H11g30247 | C2H11g14803 | LOC_Os11g01200 | Os11g0102900 | - | Detail |
| CX11g012816 | 11:184,907-185,056 | + | - | - | - | - | - | Detail |
| CX11g013479 | 11:190,465-192,585 | + | C1H11g18930 | C2H12g00217 | LOC_Os11g01210 | Os11g0103000 | - | Detail |
| CX11g014869 | 11:193,003-197,282 | - | C1H11g15396 | C2H11g28258 | LOC_Os11g01220 | Os11g0103100 | - | Detail |