| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g12934 | 2:1,768,284-1,770,418 | - | C2H2g25375 | CX2g024931 | - | - | - | Detail |
| C1H2g06628 | 2:1,795,958-1,798,034 | - | C2H2g02670 | CX2g022538 | LOC_Os02g04420 | Os02g0136800 | - | Detail |
| C1H2g05171 | 2:1,865,400-1,867,637 | - | - | - | - | - | - | Detail |
| C1H2g00123 | 2:1,900,557-1,903,339 | - | C2H2g12047 | CX2g024128 | LOC_Os02g04380 | Os02g0136400 | - | Detail |
| C1H2g08448 | 2:1,917,667-1,919,830 | + | C2H2g14251 | CX2g019511 | LOC_Os02g04430 | Os02g0136900 | - | Detail |
| C1H2g24030 | 2:1,919,845-1,920,859 | + | C2H2g01120 | CX2g019511 | LOC_Os02g04430 | Os02g0136900 | - | Detail |
| C1H2g01728 | 2:1,921,978-1,932,254 | + | C2H2g21472 | CX2g021323 | LOC_Os02g04440 | Os02g0136933 | - | Detail |
| C1H2g25254 | 2:1,933,613-1,938,788 | + | C2H2g01983 | CX2g020289 | LOC_Os02g04450 | Os02g0137100 | - | Detail |
| C1H2g02536 | 2:1,938,975-1,940,408 | - | C2H2g29206 | CX2g022486 | LOC_Os02g04460 | Os02g0137200 | PRPL3 | Detail |
| C1H2g09311 | 2:1,941,691-1,946,900 | + | C2H2g19442 | CX2g022550 | LOC_Os02g04480 | Os02g0137400 | - | Detail |
| C1H2g03672 | 2:1,948,899-1,960,539 | + | C2H2g02559 | CX2g022809 | LOC_Os02g04490 | Os02g0137500 | OsHAC703, OsHAC1 | Detail |
| C1H2g21834 | 2:1,961,604-1,964,303 | + | C2H2g05752 | CX2g024429 | LOC_Os02g04500 | Os02g0137600 | - | Detail |
| C1H2g30711 | 2:1,965,380-1,968,958 | + | C2H2g14414 | CX2g019999 | LOC_Os02g04510 | Os02g0137700 | - | Detail |
| C1H2g14196 | 2:1,970,527-1,972,543 | + | C2H2g23037 | CX2g019936 | LOC_Os02g04520 | Os02g0137800 | - | Detail |
| C1H2g19457 | 2:1,974,813-1,980,818 | + | C2H2g06996 | CX2g018918 | LOC_Os02g04530 | Os02g0137900 | - | Detail |
| C1H2g27170 | 2:1,983,748-1,985,871 | - | C2H2g13981 | CX2g023632 | LOC_Os02g04540 | Os02g0138000 | - | Detail |
| C1H2g29564 | 2:1,995,546-1,996,215 | + | C2H2g01173 | CX2g021834 | LOC_Os02g04550 | Os02g0138100 | - | Detail |
| C1H2g18051 | 2:1,996,867-1,999,793 | + | C2H2g16875 | CX2g024861 | LOC_Os02g04560 | Os02g0138200 | - | Detail |
| C1H2g25736 | 2:2,010,790-2,013,843 | + | C2H2g13634 | CX2g023377 | LOC_Os02g04630 | Os02g0138900 | OsCAX4 | Detail |
| C1H2g19857 | 2:2,014,503-2,016,667 | - | C2H2g21421 | CX2g021586 | LOC_Os02g04640 | Os02g0139000 | PHR3, OsPHR3, Os-PHR3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g012572 | 11:46,880-57,584 | - | C1H11g02445 | C2H11g12780 | - | - | - | Detail |
| CX11g013929 | 11:58,886-60,387 | - | C1H11g11120 | C2H12g28928 | LOC_Os11g01010 | Os11g0100100 | - | Detail |
| CX11g013663 | 11:60,512-63,042 | + | C1H11g00730 | C2H11g22941 | LOC_Os11g01020 | Os11g0100200 | - | Detail |
| CX11g012133 | 11:63,431-66,403 | - | C1H11g05406 | C2H11g24348 | LOC_Os11g01030 | Os11g0100300 | - | Detail |
| CX11g011920 | 11:70,790-72,075 | - | C1H11g01849 | C2H11g05219 | LOC_Os11g01040 | Os11g0100600 | - | Detail |
| CX11g013460 | 11:73,812-75,536 | - | C1H11g20414 | C2H11g01700 | - | - | - | Detail |
| CX11g014603 | 11:84,075-85,553 | - | C1H11g25936 | C2H11g26787 | LOC_Os11g01050 | Os11g0100800 | - | Detail |
| CX11g011380 | 11:89,322-96,493 | + | C1H11g21634 | C2H11g04368 | LOC_Os11g01074 | Os11g0101200 | OsRpp30 | Detail |
| CX11g010871 | 11:124,843-125,454 | + | C1H11g18239 | C2H11g29422 | LOC_Os11g01130 | Os11g0102100 | WOX3, OsWOX3, OsNS, OsPRS | Detail |
| CX11g012493 | 11:138,868-139,032 | + | - | - | - | - | - | Detail |
| CX11g013891 | 11:141,136-150,445 | + | C1H11g15262 | C2H11g14954 | LOC_Os11g01140 | Os11g0102200 | OsPHOT1a | Detail |
| CX11g011791 | 11:151,102-152,513 | - | C1H11g26777 | C2H11g23847 | - | - | - | Detail |
| CX11g011515 | 11:160,013-162,906 | + | C1H11g29895 | C2H11g08338 | LOC_Os11g01170 | Os11g0102600 | - | Detail |
| CX11g014260 | 11:164,299-165,279 | - | C1H11g00951 | C2H11g20080 | LOC_Os11g02540 | Os11g0117600 | OsWRKY50 | Detail |
| CX11g014575 | 11:166,521-167,258 | - | C1H11g00951 | C2H11g20080 | LOC_Os11g01180 | Os11g0102700 | - | Detail |
| CX11g011926 | 11:170,280-176,291 | + | C1H11g19879 | C2H11g17658 | LOC_Os12g01190 | Os11g0102800 | OsRINGC2-1 | Detail |
| CX11g014886 | 11:177,455-184,182 | - | C1H11g30247 | C2H11g14803 | LOC_Os11g01200 | Os11g0102900 | - | Detail |
| CX11g012816 | 11:184,907-185,056 | + | - | - | - | - | - | Detail |
| CX11g013479 | 11:190,465-192,585 | + | C1H11g18930 | C2H12g00217 | LOC_Os11g01210 | Os11g0103000 | - | Detail |
| CX11g014869 | 11:193,003-197,282 | - | C1H11g15396 | C2H11g28258 | LOC_Os11g01220 | Os11g0103100 | - | Detail |