| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g08097 | 3:31,303,966-31,318,802 | - | C2H3g20910 | CX3g029942 | LOC_Os03g58910 | Os03g0803800 | - | Detail |
| C1H3g06667 | 3:31,319,292-31,323,936 | - | C2H3g11137 | CX3g027632 | LOC_Os03g58920 | Os03g0803900 | - | Detail |
| C1H3g13889 | 3:31,327,556-31,330,061 | + | C2H3g08052 | CX3g025337 | LOC_Os03g58930 | Os03g0804100 | - | Detail |
| C1H3g18947 | 3:31,337,369-31,339,038 | + | C2H3g30090 | CX3g027592 | LOC_Os03g58940 | Os03g0804200 | - | Detail |
| C1H3g06901 | 3:31,339,411-31,340,040 | + | - | - | - | - | - | Detail |
| C1H3g08908 | 3:31,341,706-31,346,966 | - | C2H3g10876 | CX3g024943 | LOC_Os03g58960 | Os03g0804300 | - | Detail |
| C1H3g16246 | 3:31,348,546-31,354,250 | + | C2H3g27290 | CX3g027330 | LOC_Os03g58970 | Os03g0804400 | - | Detail |
| C1H3g07772 | 3:31,361,251-31,366,469 | + | C2H3g08677 | CX3g028935 | LOC_Os03g59020 | Os03g0804800 | - | Detail |
| C1H3g18006 | 3:31,367,537-31,369,493 | - | C2H3g02565 | CX3g027095 | LOC_Os03g59030 | Os03g0804900 | - | Detail |
| C1H3g15435 | 3:31,372,220-31,379,322 | + | C2H3g23943 | CX3g030857 | LOC_Os03g59040 | Os03g0805100 | - | Detail |
| C1H3g07263 | 3:31,379,382-31,384,682 | - | C2H3g11637 | CX3g025026 | LOC_Os03g59050 | Os03g0805200 | - | Detail |
| C1H3g20361 | 3:31,388,921-31,393,492 | + | C2H3g13249 | CX3g030776 | LOC_Os03g59060 | Os03g0805300 | OsPP2A-2 | Detail |
| C1H3g19091 | 3:31,394,936-31,397,184 | - | C2H3g08127 | CX3g031092 | LOC_Os03g59070 | Os03g0805400 | - | Detail |
| C1H3g12066 | 3:31,399,034-31,403,913 | - | C2H3g28737 | CX3g028812 | LOC_Os03g59080 | Os03g0805500 | - | Detail |
| C1H3g30858 | 3:31,406,704-31,409,160 | + | C2H3g24931 | CX3g030524 | LOC_Os03g59110 | Os03g0805600 | - | Detail |
| C1H3g05972 | 3:31,411,591-31,413,933 | + | C2H3g05002 | CX3g030524 | LOC_Os03g59100 | Os03g0805700 | - | Detail |
| C1H3g19569 | 3:31,415,492-31,418,848 | + | C2H3g16039 | CX3g030524 | LOC_Os03g59110 | Os03g0805900 | - | Detail |
| C1H3g19186 | 3:31,420,142-31,420,788 | + | C2H10g26374 | CX10g008540 | - | - | - | Detail |
| C1H3g07939 | 3:31,425,883-31,428,863 | + | C2H3g16313 | CX3g030524 | LOC_Os03g59120 | Os03g0805900 | - | Detail |
| C1H3g06635 | 3:31,429,398-31,433,079 | - | C2H3g13126 | CX3g030941 | LOC_Os03g59160 | Os03g0806400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g009148 | 10:20,679,924-20,680,097 | + | - | - | - | Os02g0188201 | - | Detail |
| CX10g010615 | 10:20,682,729-20,683,990 | + | - | C2H10g13287 | LOC_Os10g42430 | Os10g0575000 | OsbHLH009, OsMYC2 | Detail |
| CX10g009474 | 10:20,686,381-20,700,566 | - | C1H10g14300 | C2H10g17470 | LOC_Os10g42439 | Os10g0575200 | - | Detail |
| CX10g008307 | 10:20,703,297-20,703,983 | - | - | C2H10g14753 | - | Os10g0575401 | - | Detail |
| CX10g009550 | 10:20,709,666-20,714,168 | - | C1H10g18845 | C2H10g17968 | LOC_Os10g42490 | Os10g0575600 | - | Detail |
| CX10g008997 | 10:20,721,477-20,723,713 | + | C1H10g25305 | C2H10g15802 | LOC_Os10g42500 | Os10g0575700 | - | Detail |
| CX10g008808 | 10:20,725,048-20,733,839 | - | C1H10g13174 | C2H10g21826 | LOC_Os10g42510 | Os10g0575800 | - | Detail |
| CX10g010586 | 10:20,735,973-20,736,206 | + | C1H10g17063 | C2H10g18487 | LOC_Os10g42520 | - | - | Detail |
| CX10g009417 | 10:20,739,975-20,740,390 | + | C1H10g25688 | C2H10g25890 | LOC_Os10g42540 | Os10g0576000 | - | Detail |
| CX10g010419 | 10:20,745,047-20,746,075 | - | - | C2H10g07903 | LOC_Os10g42550 | Os10g0576100 | OsIpk, OsITP5/6K-5, OsITPK5 | Detail |
| CX10g009600 | 10:20,746,487-20,746,663 | + | - | - | - | - | - | Detail |
| CX10g009197 | 10:20,747,182-20,747,792 | + | - | - | - | - | - | Detail |
| CX10g010056 | 10:20,752,958-20,753,716 | - | C1H10g12760 | C2H10g03727 | LOC_Os10g42610 | Os10g0576600 | - | Detail |
| CX10g009584 | 10:20,765,990-20,768,968 | + | C1H10g11512 | C2H10g07119 | LOC_Os10g42620 | Os10g0576900 | - | Detail |
| CX10g008595 | 10:20,770,134-20,772,760 | - | C1H10g08995 | C2H10g09959 | LOC_Os10g42630 | Os10g0577000 | - | Detail |
| CX10g010012 | 10:20,774,400-20,777,024 | + | C1H10g10266 | C2H10g30665 | LOC_Os10g42640 | Os10g0577100 | - | Detail |
| CX10g010442 | 10:20,780,579-20,781,481 | - | - | C2H10g21263 | LOC_Os10g42650 | Os10g0577200 | - | Detail |
| CX10g007679 | 10:20,785,508-20,787,293 | - | C1H10g17111 | C2H10g14848 | LOC_Os10g42660 | Os10g0577400 | - | Detail |
| CX10g009164 | 10:20,789,383-20,792,206 | - | C1H10g06746 | C2H10g29699 | LOC_Os10g42670 | Os10g0577500 | - | Detail |
| CX10g008764 | 10:20,802,683-20,809,623 | + | C1H10g31645 | C2H10g08892 | LOC_Os10g42690 | Os10g0577600 | JMJ706, OsJMJ706 | Detail |