| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g25606 | 3:5,617,924-5,626,626 | - | C1H3g11455 | CX3g031100 | LOC_Os03g12160 | Os03g0221800 | - | Detail |
| C2H3g28200 | 3:5,629,758-5,631,757 | - | C1H3g05328 | CX3g028642 | LOC_Os03g12180 | Os03g0222100 | - | Detail |
| C2H3g21744 | 3:5,655,861-5,657,114 | + | C1H3g10920 | - | LOC_Os03g12210 | Os03g0222500 | - | Detail |
| C2H3g09344 | 3:5,664,107-5,666,372 | + | C1H3g07232 | CX3g031317 | LOC_Os03g12230 | Os03g0222600 | - | Detail |
| C2H3g04698 | 3:5,668,849-5,673,629 | + | C1H3g04972 | CX3g028958 | LOC_Os03g12236 | Os03g0222700 | - | Detail |
| C2H3g19892 | 3:5,674,920-5,676,941 | + | C1H3g26972 | CX3g027447 | LOC_Os03g12238 | - | - | Detail |
| C2H3g10667 | 3:5,679,824-5,684,019 | + | C1H3g14957 | CX3g031278 | LOC_Os03g12250 | Os03g0223000 | - | Detail |
| C2H3g29015 | 3:5,690,854-5,692,440 | - | C1H3g14297 | CX3g030840 | LOC_Os03g12260 | Os03g0223100 | CYP94D15, OsCYP94D15 | Detail |
| C2H3g13113 | 3:5,697,671-5,700,203 | + | C1H3g13087 | CX3g029663 | LOC_Os03g12270 | Os03g0223200 | - | Detail |
| C2H3g16993 | 3:5,702,030-5,703,478 | - | C1H3g19225 | CX3g028859 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| C2H3g28472 | 3:5,703,831-5,706,150 | - | C1H3g05930 | CX3g028859 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| C2H3g01042 | 3:5,710,893-5,718,986 | - | C1H3g02751 | CX3g025777 | LOC_Os03g12300 | Os03g0223700 | - | Detail |
| C2H3g20060 | 3:5,730,175-5,734,820 | + | C1H3g05662 | CX3g029397 | LOC_Os03g12320 | Os03g0223900 | OsLPXC | Detail |
| C2H3g29213 | 3:5,743,380-5,748,702 | + | C1H3g16565 | CX3g029992 | LOC_Os03g12350 | Os03g0224200 | - | Detail |
| C2H3g11335 | 3:5,749,246-5,753,687 | - | C1H3g12418 | CX3g029383 | LOC_Os03g12360 | Os03g0224300 | - | Detail |
| C2H3g05885 | 3:5,765,625-5,769,411 | + | C1H3g18389 | CX3g025920 | LOC_Os03g12370 | Os03g0224700 | - | Detail |
| C2H3g25300 | 3:5,773,342-5,774,361 | - | C1H3g09012 | CX3g025136 | LOC_Os03g12390 | Os03g0225100 | MPKK10.2, OsMKK10-2, MKK10-2D | Detail |
| C2H3g05543 | 3:5,781,025-5,785,623 | - | C1H3g14793 | CX3g027495 | LOC_Os03g12414 | Os03g0225200 | - | Detail |
| C2H3g22350 | 3:5,787,025-5,788,437 | - | C1H3g12506 | CX3g027176 | LOC_Os03g12430 | Os03g0225300 | - | Detail |
| C2H3g21341 | 3:5,789,758-5,791,688 | + | C1H3g26939 | CX3g025280 | LOC_Os03g12440 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g007387 | 10:19,608,123-19,608,410 | + | - | - | - | - | - | Detail |
| CX10g008130 | 10:19,609,768-19,612,095 | + | C1H10g28684 | C2H10g16175 | LOC_Os10g40360 | Os10g0550900 | OsProDH | Detail |
| CX10g009199 | 10:19,619,396-19,619,587 | + | - | - | - | - | - | Detail |
| CX10g009109 | 10:19,625,809-19,627,785 | - | C1H10g18426 | C2H10g16357 | LOC_Os10g40390 | Os10g0551200 | - | Detail |
| CX10g007885 | 10:19,637,751-19,638,553 | + | C1H10g02147 | C2H10g25648 | LOC_Os10g40410 | Os10g0551600 | - | Detail |
| CX10g010244 | 10:19,665,343-19,667,520 | + | C1H10g16990 | C2H10g20857 | LOC_Os10g40490 | Os10g0552400 | OsPUB67 | Detail |
| CX10g009243 | 10:19,686,601-19,690,404 | - | C1H10g00109 | C2H10g30026 | LOC_Os10g40540 | Os10g0552900 | - | Detail |
| CX10g007861 | 10:19,691,410-19,693,378 | - | C1H10g22459 | C2H10g15388 | LOC_Os10g40550 | Os10g0553300 | OsTPP2 | Detail |
| CX10g007951 | 10:19,703,241-19,704,635 | + | - | C2H10g20936 | LOC_Os10g40559 | Os10g0553600 | - | Detail |
| CX10g010487 | 10:19,706,072-19,708,399 | - | C1H10g10527 | C2H10g19034 | LOC_Os10g40570 | Os10g0553800 | - | Detail |
| CX10g007646 | 10:19,711,920-19,712,087 | - | - | - | - | - | - | Detail |
| CX10g008961 | 10:19,713,060-19,716,613 | + | C1H10g16545 | - | LOC_Os10g40580 | Os10g0553900 | - | Detail |
| CX10g009910 | 10:19,722,177-19,723,049 | - | - | C2H10g03378 | LOC_Os10g40584 | Os10g0554001 | - | Detail |
| CX10g007757 | 10:19,728,740-19,728,904 | + | - | - | - | - | - | Detail |
| CX10g007550 | 10:19,730,412-19,735,245 | + | C1H10g18964 | C2H10g02267 | LOC_Os10g40590 | Os10g0554100 | - | Detail |
| CX10g009390 | 10:19,737,417-19,742,213 | - | C1H10g16439 | C2H10g07153 | LOC_Os10g40600 | Os10g0554200 | NRT1.1B, OsNRT1.1B, OsNPF6.5, NPF6.5 | Detail |
| CX10g007440 | 10:19,755,066-19,755,296 | + | - | - | - | - | - | Detail |
| CX10g008553 | 10:19,755,720-19,757,789 | - | C1H10g00556 | C2H10g19889 | LOC_Os10g40610 | Os10g0554300 | - | Detail |
| CX10g008074 | 10:19,762,447-19,763,722 | - | C1H10g29784 | C2H10g14918 | LOC_Os10g40620 | Os10g0554900 | - | Detail |
| CX10g010159 | 10:19,763,781-19,764,350 | - | C1H10g29784 | C2H10g14918 | LOC_Os10g40620 | - | - | Detail |