| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g25947 | 1:9,237,227-9,238,700 | - | C1H1g02909 | CX1g001405 | LOC_Os11g02650 | - | - | Detail |
| C2H1g12260 | 1:9,240,388-9,240,864 | - | C1H1g25972 | - | LOC_Os01g13050 | Os01g0861400 | - | Detail |
| C2H1g13264 | 1:9,242,580-9,246,152 | + | C1H1g02936 | CX1g004036 | LOC_Os01g18320 | Os01g0286600 | OsPPO1 | Detail |
| C2H1g18493 | 1:9,260,032-9,263,328 | + | C1H1g02001 | CX1g000296 | LOC_Os01g18360 | Os01g0286900 | - | Detail |
| C2H1g16973 | 1:9,300,519-9,300,707 | + | C1H1g26094 | CX1g002314 | LOC_Os05g04700 | - | - | Detail |
| C2H1g04657 | 1:9,303,104-9,303,481 | - | C1H1g20358 | CX1g007034 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| C2H1g10428 | 1:9,303,977-9,304,468 | - | C1H1g26001 | CX1g007034 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| C2H1g21581 | 1:9,332,228-9,332,588 | - | C1H1g01375 | CX1g005603 | LOC_Os01g18450 | Os01g0288200 | - | Detail |
| C2H1g03324 | 1:9,346,774-9,347,076 | - | C1H1g15975 | - | LOC_Os01g18490 | Os01g0288800 | - | Detail |
| C2H1g30606 | 1:9,356,690-9,356,998 | - | C1H1g15975 | CX1g006610 | LOC_Os01g18530 | Os01g0289100 | - | Detail |
| C2H1g28353 | 1:9,359,956-9,360,261 | - | C1H1g15975 | CX1g006610 | LOC_Os01g18530 | Os01g0289100 | - | Detail |
| C2H1g00434 | 1:9,390,275-9,396,795 | + | C1H1g27658 | CX1g004171 | LOC_Os01g18584 | Os01g0289600 | - | Detail |
| C2H1g15794 | 1:9,410,669-9,412,142 | - | C1H1g31040 | CX1g002453 | LOC_Os01g18620 | Os01g0289900 | - | Detail |
| C2H1g01894 | 1:9,427,709-9,431,055 | - | C1H1g10493 | - | LOC_Os01g17080 | - | - | Detail |
| C2H1g23760 | 1:9,431,767-9,433,279 | - | C1H1g09358 | CX1g003482 | LOC_Os01g18620 | Os01g0289900 | - | Detail |
| C2H1g28620 | 1:9,434,748-9,438,379 | - | C1H1g20536 | CX1g007116 | LOC_Os01g18630 | Os01g0290000 | - | Detail |
| C2H1g18032 | 1:9,442,152-9,443,594 | - | C1H1g06449 | CX1g001189 | LOC_Os01g18640 | Os01g0290100 | OsLCD1 | Detail |
| C2H1g16260 | 1:9,448,085-9,449,515 | + | C1H1g00431 | CX1g003793 | LOC_Os01g18660 | Os01g0290600 | OsLCD2, OsCS1 | Detail |
| C2H1g08075 | 1:9,454,121-9,460,331 | - | C1H1g25669 | CX1g004035 | LOC_Os01g18670 | Os01g0290700 | - | Detail |
| C2H1g01408 | 1:9,467,543-9,469,804 | + | C1H1g05215 | CX1g000749 | LOC_Os11g10490 | Os01g0807000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g007387 | 10:19,608,123-19,608,410 | + | - | - | - | - | - | Detail |
| CX10g008130 | 10:19,609,768-19,612,095 | + | C1H10g28684 | C2H10g16175 | LOC_Os10g40360 | Os10g0550900 | OsProDH | Detail |
| CX10g009199 | 10:19,619,396-19,619,587 | + | - | - | - | - | - | Detail |
| CX10g009109 | 10:19,625,809-19,627,785 | - | C1H10g18426 | C2H10g16357 | LOC_Os10g40390 | Os10g0551200 | - | Detail |
| CX10g007885 | 10:19,637,751-19,638,553 | + | C1H10g02147 | C2H10g25648 | LOC_Os10g40410 | Os10g0551600 | - | Detail |
| CX10g010244 | 10:19,665,343-19,667,520 | + | C1H10g16990 | C2H10g20857 | LOC_Os10g40490 | Os10g0552400 | OsPUB67 | Detail |
| CX10g009243 | 10:19,686,601-19,690,404 | - | C1H10g00109 | C2H10g30026 | LOC_Os10g40540 | Os10g0552900 | - | Detail |
| CX10g007861 | 10:19,691,410-19,693,378 | - | C1H10g22459 | C2H10g15388 | LOC_Os10g40550 | Os10g0553300 | OsTPP2 | Detail |
| CX10g007951 | 10:19,703,241-19,704,635 | + | - | C2H10g20936 | LOC_Os10g40559 | Os10g0553600 | - | Detail |
| CX10g010487 | 10:19,706,072-19,708,399 | - | C1H10g10527 | C2H10g19034 | LOC_Os10g40570 | Os10g0553800 | - | Detail |
| CX10g007646 | 10:19,711,920-19,712,087 | - | - | - | - | - | - | Detail |
| CX10g008961 | 10:19,713,060-19,716,613 | + | C1H10g16545 | - | LOC_Os10g40580 | Os10g0553900 | - | Detail |
| CX10g009910 | 10:19,722,177-19,723,049 | - | - | C2H10g03378 | LOC_Os10g40584 | Os10g0554001 | - | Detail |
| CX10g007757 | 10:19,728,740-19,728,904 | + | - | - | - | - | - | Detail |
| CX10g007550 | 10:19,730,412-19,735,245 | + | C1H10g18964 | C2H10g02267 | LOC_Os10g40590 | Os10g0554100 | - | Detail |
| CX10g009390 | 10:19,737,417-19,742,213 | - | C1H10g16439 | C2H10g07153 | LOC_Os10g40600 | Os10g0554200 | NRT1.1B, OsNRT1.1B, OsNPF6.5, NPF6.5 | Detail |
| CX10g007440 | 10:19,755,066-19,755,296 | + | - | - | - | - | - | Detail |
| CX10g008553 | 10:19,755,720-19,757,789 | - | C1H10g00556 | C2H10g19889 | LOC_Os10g40610 | Os10g0554300 | - | Detail |
| CX10g008074 | 10:19,762,447-19,763,722 | - | C1H10g29784 | C2H10g14918 | LOC_Os10g40620 | Os10g0554900 | - | Detail |
| CX10g010159 | 10:19,763,781-19,764,350 | - | C1H10g29784 | C2H10g14918 | LOC_Os10g40620 | - | - | Detail |