| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g05653 | 4:25,086,986-25,088,838 | + | C2H4g12182 | CX4g034878 | LOC_Os04g48460 | Os04g0573900 | - | Detail |
| C1H4g04086 | 4:25,110,365-25,110,610 | - | C2H4g16583 | - | - | - | - | Detail |
| C1H4g21019 | 4:25,112,176-25,119,128 | + | - | CX4g033081 | LOC_Os04g49080 | Os04g0574500 | - | Detail |
| C1H4g09609 | 4:25,123,600-25,124,341 | + | C2H4g07929 | CX4g033081 | LOC_Os04g48510 | Os04g0574500 | - | Detail |
| C1H4g00913 | 4:25,125,803-25,133,464 | + | C2H4g08470 | CX4g033136 | LOC_Os04g48530 | Os04g0574700 | SLAC1, OsSLAC1 | Detail |
| C1H4g26247 | 4:25,133,614-25,135,630 | - | C2H4g06957 | CX4g035550 | LOC_Os04g48540 | Os04g0574800 | DHDPS1 | Detail |
| C1H4g08392 | 4:25,246,406-25,247,976 | + | - | - | LOC_Os04g48710 | Os04g0576500 | - | Detail |
| C1H4g22243 | 4:25,263,484-25,265,733 | - | C2H4g26447 | - | - | Os04g0576600 | - | Detail |
| C1H4g15551 | 4:25,279,689-25,283,017 | + | C2H4g17330 | CX4g033751 | LOC_Os04g48730 | Os04g0576700 | - | Detail |
| C1H4g16511 | 4:25,285,717-25,290,647 | + | C2H4g28918 | CX4g031926 | LOC_Os04g48750 | Os04g0576800 | - | Detail |
| C1H4g00939 | 4:25,303,694-25,306,942 | + | C2H4g02682 | CX4g032798 | LOC_Os04g48770 | Os04g0577000 | - | Detail |
| C1H4g29789 | 4:25,315,201-25,319,005 | + | C2H4g06759 | CX4g034166 | LOC_Os04g48790 | Os04g0577200 | - | Detail |
| C1H4g21419 | 4:25,319,760-25,321,256 | + | C2H4g02885 | CX4g031549 | LOC_Os04g48800 | Os04g0577300 | - | Detail |
| C1H4g20329 | 4:25,324,072-25,328,331 | - | C2H4g14499 | CX4g035442 | LOC_Os04g48820 | Os04g0577500 | - | Detail |
| C1H4g03454 | 4:25,330,345-25,331,457 | + | C2H4g16860 | CX4g034935 | LOC_Os04g48830 | Os04g0577700 | - | Detail |
| C1H4g22772 | 4:25,333,370-25,333,889 | - | C2H4g10805 | - | LOC_Os04g48840 | Os04g0577800 | - | Detail |
| C1H4g00141 | 4:25,336,398-25,336,833 | - | C2H4g05203 | CX4g036558 | LOC_Os04g48840 | Os04g0577800 | - | Detail |
| C1H4g25198 | 4:25,347,668-25,349,168 | + | - | - | - | - | - | Detail |
| C1H4g25724 | 4:25,353,782-25,355,925 | - | C2H4g06518 | CX4g036415 | LOC_Os04g48850 | Os04g0578000 | ACS2, OsACS2, Os-ACS2 | Detail |
| C1H4g24454 | 4:25,370,752-25,371,945 | + | C2H4g19030 | CX4g032177 | - | Os04g0578200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g007387 | 10:19,608,123-19,608,410 | + | - | - | - | - | - | Detail |
| CX10g008130 | 10:19,609,768-19,612,095 | + | C1H10g28684 | C2H10g16175 | LOC_Os10g40360 | Os10g0550900 | OsProDH | Detail |
| CX10g009199 | 10:19,619,396-19,619,587 | + | - | - | - | - | - | Detail |
| CX10g009109 | 10:19,625,809-19,627,785 | - | C1H10g18426 | C2H10g16357 | LOC_Os10g40390 | Os10g0551200 | - | Detail |
| CX10g007885 | 10:19,637,751-19,638,553 | + | C1H10g02147 | C2H10g25648 | LOC_Os10g40410 | Os10g0551600 | - | Detail |
| CX10g010244 | 10:19,665,343-19,667,520 | + | C1H10g16990 | C2H10g20857 | LOC_Os10g40490 | Os10g0552400 | OsPUB67 | Detail |
| CX10g009243 | 10:19,686,601-19,690,404 | - | C1H10g00109 | C2H10g30026 | LOC_Os10g40540 | Os10g0552900 | - | Detail |
| CX10g007861 | 10:19,691,410-19,693,378 | - | C1H10g22459 | C2H10g15388 | LOC_Os10g40550 | Os10g0553300 | OsTPP2 | Detail |
| CX10g007951 | 10:19,703,241-19,704,635 | + | - | C2H10g20936 | LOC_Os10g40559 | Os10g0553600 | - | Detail |
| CX10g010487 | 10:19,706,072-19,708,399 | - | C1H10g10527 | C2H10g19034 | LOC_Os10g40570 | Os10g0553800 | - | Detail |
| CX10g007646 | 10:19,711,920-19,712,087 | - | - | - | - | - | - | Detail |
| CX10g008961 | 10:19,713,060-19,716,613 | + | C1H10g16545 | - | LOC_Os10g40580 | Os10g0553900 | - | Detail |
| CX10g009910 | 10:19,722,177-19,723,049 | - | - | C2H10g03378 | LOC_Os10g40584 | Os10g0554001 | - | Detail |
| CX10g007757 | 10:19,728,740-19,728,904 | + | - | - | - | - | - | Detail |
| CX10g007550 | 10:19,730,412-19,735,245 | + | C1H10g18964 | C2H10g02267 | LOC_Os10g40590 | Os10g0554100 | - | Detail |
| CX10g009390 | 10:19,737,417-19,742,213 | - | C1H10g16439 | C2H10g07153 | LOC_Os10g40600 | Os10g0554200 | NRT1.1B, OsNRT1.1B, OsNPF6.5, NPF6.5 | Detail |
| CX10g007440 | 10:19,755,066-19,755,296 | + | - | - | - | - | - | Detail |
| CX10g008553 | 10:19,755,720-19,757,789 | - | C1H10g00556 | C2H10g19889 | LOC_Os10g40610 | Os10g0554300 | - | Detail |
| CX10g008074 | 10:19,762,447-19,763,722 | - | C1H10g29784 | C2H10g14918 | LOC_Os10g40620 | Os10g0554900 | - | Detail |
| CX10g010159 | 10:19,763,781-19,764,350 | - | C1H10g29784 | C2H10g14918 | LOC_Os10g40620 | - | - | Detail |