| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g16447 | 4:14,642,666-14,645,568 | - | C2H4g26507 | CX4g033406 | LOC_Os04g29880 | Os04g0367201 | - | Detail |
| C1H4g15981 | 4:14,651,299-14,652,682 | + | C2H4g19842 | CX4g036217 | LOC_Os04g29920 | Os04g0367400 | - | Detail |
| C1H4g22817 | 4:14,658,861-14,662,247 | - | C2H4g09256 | CX4g035931 | LOC_Os04g30060 | Os04g0367900 | - | Detail |
| C1H4g03650 | 4:14,675,178-14,676,212 | - | C2H4g11929 | CX4g035309 | LOC_Os04g29990 | Os04g0368300 | - | Detail |
| C1H4g01982 | 4:14,676,531-14,678,185 | - | C2H4g06332 | CX4g035309 | LOC_Os04g29990 | Os04g0368300 | - | Detail |
| C1H4g02308 | 4:14,685,296-14,686,511 | - | C2H4g00649 | CX4g032076 | LOC_Os04g30040 | Os04g0369066 | - | Detail |
| C1H4g01234 | 4:14,703,923-14,708,949 | + | C2H4g00649 | CX4g032089 | LOC_Os04g30030 | Os04g0369066 | - | Detail |
| C1H4g15645 | 4:14,718,676-14,721,463 | - | C2H4g05483 | CX4g036156 | LOC_Os04g30110 | Os04g0369600 | - | Detail |
| C1H4g19894 | 4:14,738,941-14,741,894 | + | C2H4g11490 | CX4g033464 | LOC_Os04g30870 | Os04g0443000 | - | Detail |
| C1H4g03035 | 4:14,764,101-14,765,726 | - | C2H4g09256 | CX4g035309 | LOC_Os04g30160 | Os04g0370100 | - | Detail |
| C1H4g14194 | 4:14,781,667-14,782,165 | - | - | - | - | - | - | Detail |
| C1H4g26495 | 4:14,792,539-14,794,020 | + | - | - | LOC_Os04g30180 | Os04g0370300 | - | Detail |
| C1H4g13429 | 4:14,813,707-14,815,055 | - | C2H4g09401 | CX4g035309 | LOC_Os04g30010 | Os04g0371100 | - | Detail |
| C1H4g21137 | 4:14,838,474-14,839,454 | + | - | - | LOC_Os04g30200 | Os04g0370300 | - | Detail |
| C1H4g07441 | 4:14,845,722-14,846,090 | + | - | - | LOC_Os04g30180 | Os04g0370500 | - | Detail |
| C1H4g00816 | 4:14,849,852-14,852,508 | + | - | - | LOC_Os04g30200 | Os04g0370500 | - | Detail |
| C1H4g00785 | 4:14,859,311-14,859,530 | - | - | - | - | - | - | Detail |
| C1H4g27199 | 4:15,210,916-15,211,194 | + | C2H4g03433 | - | - | - | - | Detail |
| C1H4g09740 | 4:15,214,899-15,222,222 | + | C2H4g22506 | - | - | Os04g0344100 | - | Detail |
| C1H4g31096 | 4:15,269,674-15,273,191 | - | C2H4g09256 | - | LOC_Os04g30270 | Os04g0371200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g007387 | 10:19,608,123-19,608,410 | + | - | - | - | - | - | Detail |
| CX10g008130 | 10:19,609,768-19,612,095 | + | C1H10g28684 | C2H10g16175 | LOC_Os10g40360 | Os10g0550900 | OsProDH | Detail |
| CX10g009199 | 10:19,619,396-19,619,587 | + | - | - | - | - | - | Detail |
| CX10g009109 | 10:19,625,809-19,627,785 | - | C1H10g18426 | C2H10g16357 | LOC_Os10g40390 | Os10g0551200 | - | Detail |
| CX10g007885 | 10:19,637,751-19,638,553 | + | C1H10g02147 | C2H10g25648 | LOC_Os10g40410 | Os10g0551600 | - | Detail |
| CX10g010244 | 10:19,665,343-19,667,520 | + | C1H10g16990 | C2H10g20857 | LOC_Os10g40490 | Os10g0552400 | OsPUB67 | Detail |
| CX10g009243 | 10:19,686,601-19,690,404 | - | C1H10g00109 | C2H10g30026 | LOC_Os10g40540 | Os10g0552900 | - | Detail |
| CX10g007861 | 10:19,691,410-19,693,378 | - | C1H10g22459 | C2H10g15388 | LOC_Os10g40550 | Os10g0553300 | OsTPP2 | Detail |
| CX10g007951 | 10:19,703,241-19,704,635 | + | - | C2H10g20936 | LOC_Os10g40559 | Os10g0553600 | - | Detail |
| CX10g010487 | 10:19,706,072-19,708,399 | - | C1H10g10527 | C2H10g19034 | LOC_Os10g40570 | Os10g0553800 | - | Detail |
| CX10g007646 | 10:19,711,920-19,712,087 | - | - | - | - | - | - | Detail |
| CX10g008961 | 10:19,713,060-19,716,613 | + | C1H10g16545 | - | LOC_Os10g40580 | Os10g0553900 | - | Detail |
| CX10g009910 | 10:19,722,177-19,723,049 | - | - | C2H10g03378 | LOC_Os10g40584 | Os10g0554001 | - | Detail |
| CX10g007757 | 10:19,728,740-19,728,904 | + | - | - | - | - | - | Detail |
| CX10g007550 | 10:19,730,412-19,735,245 | + | C1H10g18964 | C2H10g02267 | LOC_Os10g40590 | Os10g0554100 | - | Detail |
| CX10g009390 | 10:19,737,417-19,742,213 | - | C1H10g16439 | C2H10g07153 | LOC_Os10g40600 | Os10g0554200 | NRT1.1B, OsNRT1.1B, OsNPF6.5, NPF6.5 | Detail |
| CX10g007440 | 10:19,755,066-19,755,296 | + | - | - | - | - | - | Detail |
| CX10g008553 | 10:19,755,720-19,757,789 | - | C1H10g00556 | C2H10g19889 | LOC_Os10g40610 | Os10g0554300 | - | Detail |
| CX10g008074 | 10:19,762,447-19,763,722 | - | C1H10g29784 | C2H10g14918 | LOC_Os10g40620 | Os10g0554900 | - | Detail |
| CX10g010159 | 10:19,763,781-19,764,350 | - | C1H10g29784 | C2H10g14918 | LOC_Os10g40620 | - | - | Detail |