| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g12302 | 4:27,689,078-27,689,997 | + | C2H4g27530 | CX4g036439 | LOC_Os04g50030 | Os04g0590200 | OsAHL9 | Detail |
| C1H4g16693 | 4:27,695,594-27,697,201 | + | C2H4g00430 | CX4g031650 | LOC_Os04g53120 | Os04g0622600 | Xa1 | Detail |
| C1H4g15194 | 4:27,698,606-27,699,806 | - | C2H4g22065 | CX4g035247 | LOC_Os04g53130 | Os04g0623100 | - | Detail |
| C1H4g02455 | 4:27,713,215-27,713,869 | - | C2H4g00348 | CX4g033709 | - | Os04g0622501 | - | Detail |
| C1H4g21467 | 4:27,726,099-27,727,384 | + | C2H4g08898 | CX4g031650 | LOC_Os04g53160 | Os04g0623066 | - | Detail |
| C1H4g07870 | 4:27,729,783-27,731,823 | - | C2H4g22065 | CX4g035247 | LOC_Os04g53170 | Os04g0623100 | - | Detail |
| C1H4g31518 | 4:27,735,782-27,741,577 | - | C2H4g13216 | CX4g033545 | LOC_Os04g53190 | Os04g0623300 | - | Detail |
| C1H4g28735 | 4:27,749,842-27,752,577 | - | C2H4g00578 | CX4g035759 | LOC_Os04g53200 | Os04g0623400 | - | Detail |
| C1H4g05306 | 4:27,758,196-27,761,940 | + | C2H4g14246 | CX4g032318 | LOC_Os04g53210 | Os04g0623500 | - | Detail |
| C1H4g08239 | 4:27,762,386-27,767,160 | + | C2H4g02179 | CX4g032896 | LOC_Os04g53214 | Os04g0623500 | - | Detail |
| C1H4g06497 | 4:27,768,235-27,770,355 | + | C2H4g17188 | CX4g036610 | LOC_Os04g53220 | Os04g0623700 | - | Detail |
| C1H4g30464 | 4:27,771,258-27,774,047 | + | C2H4g03695 | CX4g033220 | LOC_Os04g53230 | Os04g0623800 | - | Detail |
| C1H4g02029 | 4:27,783,580-27,785,753 | - | C2H4g14747 | CX4g034233 | LOC_Os04g53240 | Os04g0624000 | OsATG8b | Detail |
| C1H4g27906 | 4:27,789,431-27,792,180 | + | C2H4g05270 | CX4g032571 | LOC_Os04g53300 | Os04g0624500 | BH1, Phr1 | Detail |
| C1H4g07313 | 4:27,792,322-27,800,310 | - | C2H4g11126 | CX4g035390 | LOC_Os04g53310 | Os04g0624600 | - | Detail |
| C1H4g13571 | 4:27,805,507-27,806,976 | - | C2H4g28602 | CX4g036647 | LOC_Os04g53330 | Os04g0624800 | - | Detail |
| C1H4g00227 | 4:27,810,761-27,814,396 | - | C2H4g19898 | CX4g033272 | LOC_Os04g53350 | Os04g0625000 | - | Detail |
| C1H4g29072 | 4:27,818,833-27,822,452 | + | C2H4g13433 | CX4g031861 | LOC_Os04g53360 | Os04g0625100 | - | Detail |
| C1H4g19977 | 4:27,827,051-27,828,490 | + | C2H4g25129 | CX4g033103 | LOC_Os04g53370 | Os04g0625200 | - | Detail |
| C1H4g19059 | 4:27,829,014-27,841,558 | - | C2H4g13881 | CX4g032976 | LOC_Os04g53380 | Os04g0625350 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g008275 | 10:19,317,543-19,320,277 | - | C1H10g09777 | C2H10g02850 | LOC_Os10g39790 | Os10g0545000 | - | Detail |
| CX10g007710 | 10:19,320,618-19,322,285 | + | C1H10g16777 | C2H10g26813 | LOC_Os10g39800 | Os10g0545100 | - | Detail |
| CX10g009802 | 10:19,324,537-19,324,749 | - | - | - | - | - | - | Detail |
| CX10g009574 | 10:19,327,189-19,329,895 | + | C1H10g15543 | C2H10g28387 | LOC_Os10g39810 | Os10g0545200 | - | Detail |
| CX10g007854 | 10:19,330,756-19,333,284 | - | C1H10g11047 | C2H10g20634 | LOC_Os10g39820 | Os10g0545300 | - | Detail |
| CX10g008336 | 10:19,335,468-19,335,956 | + | C1H10g09139 | C2H10g21934 | LOC_Os10g39830 | - | - | Detail |
| CX10g009738 | 10:19,339,203-19,341,154 | + | C1H10g24175 | C2H10g05814 | LOC_Os10g39840 | Os10g0545500 | - | Detail |
| CX10g008172 | 10:19,342,288-19,346,448 | - | C1H10g13577 | C2H10g14844 | LOC_Os10g39850 | Os10g0545600 | - | Detail |
| CX10g010469 | 10:19,347,401-19,349,407 | + | C1H10g13418 | C2H10g24798 | LOC_Os10g39860 | Os10g0545700 | ACR2.1, OsACR2.1, CDC25.1, OsStr20 | Detail |
| CX10g009885 | 10:19,352,242-19,353,039 | + | C1H10g14742 | C2H10g12311 | LOC_Os10g39870 | Os10g0545800 | - | Detail |
| CX10g009616 | 10:19,355,801-19,356,921 | + | C1H10g20935 | C2H10g27517 | LOC_Os10g39890 | Os10g0546100 | - | Detail |
| CX10g009134 | 10:19,358,338-19,365,148 | + | C1H10g00272 | C2H10g01701 | LOC_Os10g39900 | Os10g0546200 | - | Detail |
| CX10g009883 | 10:19,368,836-19,377,325 | + | C1H10g04018 | C2H10g23017 | LOC_Os10g39910 | Os10g0546300 | - | Detail |
| CX10g008515 | 10:19,379,216-19,379,593 | - | C1H3g00509 | C2H10g14373 | LOC_Os10g39920 | Os10g0546400 | SMR1 | Detail |
| CX10g009273 | 10:19,384,926-19,389,224 | + | C1H10g10076 | C2H10g19209 | LOC_Os10g39930 | Os10g0546600 | - | Detail |
| CX10g008917 | 10:19,399,058-19,399,957 | + | - | - | - | Os10g0546900 | - | Detail |
| CX10g010451 | 10:19,402,944-19,411,498 | - | C1H10g25210 | C2H10g02665 | LOC_Os10g39950 | Os10g0547000 | - | Detail |
| CX10g008083 | 10:19,417,692-19,418,057 | - | - | C2H10g27212 | LOC_Os10g39970 | Os10g0547200 | - | Detail |
| CX10g009025 | 10:19,425,557-19,427,857 | + | C1H10g00072 | C2H10g04053 | LOC_Os10g39980 | Os10g0547500 | Lsi3, Lsi3/SIET2 | Detail |
| CX10g010516 | 10:19,441,528-19,444,058 | - | C1H10g23409 | C2H10g27790 | LOC_Os10g40020 | Os10g0547900 | - | Detail |