| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g23847 | 3:5,074,164-5,076,920 | + | C2H3g02775 | CX3g030551 | LOC_Os03g11040 | Os03g0208800 | - | Detail |
| C1H3g19795 | 3:5,077,599-5,082,271 | - | C2H3g21926 | CX3g025131 | LOC_Os03g11050 | Os03g0208900 | - | Detail |
| C1H3g29509 | 3:5,083,675-5,084,148 | + | C2H3g02600 | CX3g026202 | LOC_Os03g11060 | Os03g0209000 | - | Detail |
| C1H3g10782 | 3:5,093,738-5,095,149 | + | C2H3g29617 | CX3g026445 | LOC_Os03g11100 | Os03g0209400 | GOT1B, GLUP2/GOT1B, GPA4 | Detail |
| C1H3g28553 | 3:5,095,752-5,100,489 | - | C2H3g20518 | CX3g027814 | LOC_Os03g11110 | Os03g0209500 | - | Detail |
| C1H3g28595 | 3:5,104,579-5,112,065 | + | C2H3g02047 | CX3g027707 | LOC_Os03g11120 | Os03g0209600 | - | Detail |
| C1H3g28031 | 3:5,112,641-5,115,756 | + | C2H3g27933 | CX3g029679 | LOC_Os03g15190 | Os03g0209700 | - | Detail |
| C1H3g31436 | 3:5,118,643-5,128,768 | + | C2H3g21412 | CX3g026421 | LOC_Os03g11140 | Os03g0209800 | - | Detail |
| C1H3g26339 | 3:5,133,030-5,133,368 | - | C2H3g16472 | CX3g027593 | LOC_Os03g11160 | Os03g0210000 | - | Detail |
| C1H3g24055 | 3:5,135,527-5,135,880 | - | C2H3g27277 | CX3g025375 | LOC_Os03g11170 | Os03g0210100 | - | Detail |
| C1H3g27613 | 3:5,138,280-5,138,636 | - | C2H3g18125 | CX3g028377 | LOC_Os03g11180 | Os03g0210200 | - | Detail |
| C1H3g13004 | 3:5,142,266-5,149,103 | - | C2H3g21913 | CX3g029308 | LOC_Os03g11200 | Os03g0210400 | - | Detail |
| C1H3g15282 | 3:5,152,250-5,154,481 | + | C2H3g25075 | CX3g030415 | LOC_Os03g11210 | Os03g0210500 | - | Detail |
| C1H3g18916 | 3:5,157,253-5,158,398 | - | C2H3g24832 | CX3g031148 | LOC_Os03g11220 | Os03g0210600 | - | Detail |
| C1H3g29587 | 3:5,159,200-5,160,188 | + | C2H3g17169 | CX3g025909 | LOC_Os03g11230 | Os03g0210700 | - | Detail |
| C1H3g28959 | 3:5,160,757-5,170,367 | - | C2H3g29083 | CX3g029919 | LOC_Os03g11240 | Os03g0210800 | - | Detail |
| C1H3g06712 | 3:5,174,708-5,175,186 | + | C2H3g10848 | CX3g028792 | LOC_Os03g11250 | Os03g0210900 | - | Detail |
| C1H3g11024 | 3:5,178,358-5,180,068 | + | C2H3g14713 | CX3g028627 | LOC_Os03g11260 | Os03g0211100 | - | Detail |
| C1H3g11102 | 3:5,189,026-5,194,028 | + | - | - | - | - | - | Detail |
| C1H3g14759 | 3:5,194,532-5,196,764 | - | C2H3g19439 | CX3g028056 | LOC_Os03g11300 | Os03g0211500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g008275 | 10:19,317,543-19,320,277 | - | C1H10g09777 | C2H10g02850 | LOC_Os10g39790 | Os10g0545000 | - | Detail |
| CX10g007710 | 10:19,320,618-19,322,285 | + | C1H10g16777 | C2H10g26813 | LOC_Os10g39800 | Os10g0545100 | - | Detail |
| CX10g009802 | 10:19,324,537-19,324,749 | - | - | - | - | - | - | Detail |
| CX10g009574 | 10:19,327,189-19,329,895 | + | C1H10g15543 | C2H10g28387 | LOC_Os10g39810 | Os10g0545200 | - | Detail |
| CX10g007854 | 10:19,330,756-19,333,284 | - | C1H10g11047 | C2H10g20634 | LOC_Os10g39820 | Os10g0545300 | - | Detail |
| CX10g008336 | 10:19,335,468-19,335,956 | + | C1H10g09139 | C2H10g21934 | LOC_Os10g39830 | - | - | Detail |
| CX10g009738 | 10:19,339,203-19,341,154 | + | C1H10g24175 | C2H10g05814 | LOC_Os10g39840 | Os10g0545500 | - | Detail |
| CX10g008172 | 10:19,342,288-19,346,448 | - | C1H10g13577 | C2H10g14844 | LOC_Os10g39850 | Os10g0545600 | - | Detail |
| CX10g010469 | 10:19,347,401-19,349,407 | + | C1H10g13418 | C2H10g24798 | LOC_Os10g39860 | Os10g0545700 | ACR2.1, OsACR2.1, CDC25.1, OsStr20 | Detail |
| CX10g009885 | 10:19,352,242-19,353,039 | + | C1H10g14742 | C2H10g12311 | LOC_Os10g39870 | Os10g0545800 | - | Detail |
| CX10g009616 | 10:19,355,801-19,356,921 | + | C1H10g20935 | C2H10g27517 | LOC_Os10g39890 | Os10g0546100 | - | Detail |
| CX10g009134 | 10:19,358,338-19,365,148 | + | C1H10g00272 | C2H10g01701 | LOC_Os10g39900 | Os10g0546200 | - | Detail |
| CX10g009883 | 10:19,368,836-19,377,325 | + | C1H10g04018 | C2H10g23017 | LOC_Os10g39910 | Os10g0546300 | - | Detail |
| CX10g008515 | 10:19,379,216-19,379,593 | - | C1H3g00509 | C2H10g14373 | LOC_Os10g39920 | Os10g0546400 | SMR1 | Detail |
| CX10g009273 | 10:19,384,926-19,389,224 | + | C1H10g10076 | C2H10g19209 | LOC_Os10g39930 | Os10g0546600 | - | Detail |
| CX10g008917 | 10:19,399,058-19,399,957 | + | - | - | - | Os10g0546900 | - | Detail |
| CX10g010451 | 10:19,402,944-19,411,498 | - | C1H10g25210 | C2H10g02665 | LOC_Os10g39950 | Os10g0547000 | - | Detail |
| CX10g008083 | 10:19,417,692-19,418,057 | - | - | C2H10g27212 | LOC_Os10g39970 | Os10g0547200 | - | Detail |
| CX10g009025 | 10:19,425,557-19,427,857 | + | C1H10g00072 | C2H10g04053 | LOC_Os10g39980 | Os10g0547500 | Lsi3, Lsi3/SIET2 | Detail |
| CX10g010516 | 10:19,441,528-19,444,058 | - | C1H10g23409 | C2H10g27790 | LOC_Os10g40020 | Os10g0547900 | - | Detail |