| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g12125 | 5:3,223,946-3,225,231 | - | C1H5g10645 | CX5g039947 | LOC_Os05g07010 | Os05g0162800 | - | Detail |
| C2H5g12999 | 5:3,234,259-3,241,968 | + | C1H5g21362 | CX5g036788 | LOC_Os05g07030 | Os05g0163000 | - | Detail |
| C2H5g16153 | 5:3,242,486-3,246,747 | - | C1H5g28911 | CX5g037977 | LOC_Os05g07040 | Os05g0163100 | - | Detail |
| C2H5g03965 | 5:3,252,487-3,262,966 | - | C1H5g18411 | CX5g040279 | LOC_Os05g07050 | Os05g0163250 | - | Detail |
| C2H5g04935 | 5:3,266,640-3,269,161 | - | C1H5g11075 | CX5g037910 | LOC_Os05g07070 | Os05g0163400 | - | Detail |
| C2H5g00170 | 5:3,278,828-3,283,127 | - | C1H5g20466 | CX5g038895 | LOC_Os05g07090 | Os05g0163700 | - | Detail |
| C2H5g23603 | 5:3,291,893-3,293,426 | + | C1H5g09469 | CX5g038094 | LOC_Os05g07120 | Os05g0163900 | - | Detail |
| C2H5g20534 | 5:3,296,950-3,305,264 | + | C1H5g27443 | CX5g038741 | LOC_Os05g07130 | Os05g0164100 | - | Detail |
| C2H5g04936 | 5:3,313,229-3,319,281 | - | C1H5g31024 | CX5g037379 | LOC_Os05g07200 | Os05g0157500 | - | Detail |
| C2H5g19390 | 5:3,323,686-3,326,781 | - | C1H5g05167 | CX5g039548 | LOC_Os05g07210 | Os05g0164800 | - | Detail |
| C2H5g25207 | 5:3,329,107-3,335,492 | - | C1H5g24618 | CX5g037261 | LOC_Os05g07220 | Os05g0164900 | OsNRP4 | Detail |
| C2H5g22059 | 5:3,336,184-3,336,871 | - | C1H1g01233 | CX5g037870 | LOC_Os11g42360 | - | - | Detail |
| C2H5g18692 | 5:3,359,435-3,361,648 | + | C1H5g06265 | CX5g037840 | LOC_Os05g07260 | Os05g0165400 | - | Detail |
| C2H5g16692 | 5:3,362,642-3,364,832 | - | C1H5g20042 | CX5g038880 | LOC_Os05g07270 | Os05g0165450 | - | Detail |
| C2H5g15984 | 5:3,397,410-3,399,313 | - | C1H5g24502 | CX5g038084 | LOC_Os05g07300 | Os05g0166300 | SDRLK-35 | Detail |
| C2H5g14533 | 5:3,401,392-3,402,964 | + | - | - | - | Os05g0166450 | - | Detail |
| C2H5g05162 | 5:3,406,480-3,407,751 | - | C1H5g02115 | CX5g038084 | LOC_Os05g07300 | Os05g0166600 | SDRLK-36 | Detail |
| C2H5g29353 | 5:3,456,059-3,457,946 | + | C1H5g29782 | CX5g038409 | LOC_Os05g07600 | Os05g0167600 | - | Detail |
| C2H5g29905 | 5:3,472,357-3,472,817 | - | C1H5g13498 | CX5g040579 | LOC_Os05g07632 | Os05g0168300 | - | Detail |
| C2H5g25838 | 5:3,472,874-3,475,722 | - | C1H5g13498 | CX5g040579 | LOC_Os05g07632 | Os05g0168300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006987 | 1:4,765,008-4,767,612 | - | C1H1g26995 | C2H1g11537 | LOC_Os01g10290 | Os01g0200000 | - | Detail |
| CX1g003266 | 1:4,778,278-4,778,790 | + | C1H1g07163 | C2H1g04474 | LOC_Os01g10310 | Os01g0200200 | - | Detail |
| CX1g001960 | 1:4,781,046-4,785,758 | - | C1H1g07309 | C2H1g25742 | LOC_Os01g10320 | Os01g0200300 | OsHB5 | Detail |
| CX1g004279 | 1:4,789,889-4,796,499 | - | C1H1g18253 | C2H1g13754 | LOC_Os01g10340 | Os01g0200400 | - | Detail |
| CX1g005266 | 1:4,796,820-4,799,724 | + | C1H1g19440 | C2H1g05709 | LOC_Os01g10350 | Os01g0200500 | - | Detail |
| CX1g001261 | 1:4,807,494-4,808,363 | - | C1H1g08378 | C2H1g21530 | LOC_Os01g10370 | Os01g0200600 | - | Detail |
| CX1g001606 | 1:4,808,626-4,808,874 | + | - | - | - | - | - | Detail |
| CX1g000013 | 1:4,826,286-4,832,034 | + | C1H1g30875 | C2H1g28750 | LOC_Os01g10430 | Os01g0201000 | - | Detail |
| CX1g006358 | 1:4,840,837-4,842,481 | + | C1H1g18217 | C2H1g28750 | LOC_Os01g10440 | Os01g0201100 | - | Detail |
| CX1g000033 | 1:4,844,234-4,846,435 | - | C1H1g30064 | C2H1g25446 | LOC_Os01g10450 | Os01g0201200 | - | Detail |
| CX1g006703 | 1:4,851,482-4,851,706 | - | - | C2H1g26595 | - | - | - | Detail |
| CX1g002489 | 1:4,863,838-4,864,473 | - | - | C2H1g20579 | - | Os01g0201250 | - | Detail |
| CX1g004892 | 1:4,863,959-4,864,516 | + | - | - | LOC_Os01g10460 | Os01g0201275 | - | Detail |
| CX1g004123 | 1:4,868,479-4,868,649 | - | - | - | - | - | - | Detail |
| CX1g002514 | 1:4,871,983-4,872,162 | - | - | - | - | - | - | Detail |
| CX1g000926 | 1:4,873,552-4,873,995 | - | - | C2H1g12275 | LOC_Os01g10470 | Os01g0201400 | OsRALF17 | Detail |
| CX1g002271 | 1:4,876,766-4,877,651 | - | C1H1g16523 | C2H1g03634 | LOC_Os01g10480 | Os01g0201500 | - | Detail |
| CX1g003008 | 1:4,882,958-4,884,049 | - | C1H1g23585 | C2H1g24699 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| CX1g000858 | 1:4,889,955-4,890,119 | - | - | - | - | - | - | Detail |
| CX1g006928 | 1:4,893,559-4,902,077 | - | C1H1g15606 | C2H1g12459 | LOC_Os01g10504 | Os01g0201700 | RAG, MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1 | Detail |