| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g26186 | 3:11,785,574-11,790,510 | - | C1H3g17947 | CX3g027882 | LOC_Os03g22800 | Os03g0351400 | - | Detail |
| C2H3g20435 | 3:11,816,196-11,817,722 | + | C1H3g29229 | CX3g027904 | LOC_Os03g22810 | Os03g0351500 | CSD1 | Detail |
| C2H3g14393 | 3:11,833,297-11,835,660 | - | C1H3g18570 | CX3g025092 | - | - | - | Detail |
| C2H3g15700 | 3:11,839,218-11,843,043 | + | C1H3g27962 | CX3g027668 | LOC_Os03g22870 | Os03g0352200 | - | Detail |
| C2H3g04437 | 3:11,843,634-11,846,602 | - | C1H3g04417 | CX3g025721 | LOC_Os03g22880 | Os03g0352300 | - | Detail |
| C2H3g25554 | 3:11,848,294-11,853,039 | + | C1H3g10842 | CX3g030381 | LOC_Os03g22890 | Os03g0352400 | OsNug2 | Detail |
| C2H3g13717 | 3:11,858,682-11,869,917 | + | C1H3g16038 | CX3g025999 | LOC_Os03g22900 | Os03g0352500 | OsINO80 | Detail |
| C2H3g17584 | 3:11,886,296-11,888,754 | - | C1H3g08430 | CX3g025916 | LOC_Os03g22950 | Os03g0352800 | OsMTACP2, CTB18 | Detail |
| C2H3g12615 | 3:11,890,640-11,891,671 | + | C1H3g07024 | CX3g029374 | LOC_Os03g22960 | Os03g0353000 | - | Detail |
| C2H3g04581 | 3:11,893,911-11,897,406 | + | C1H3g09018 | CX3g029843 | LOC_Os03g22990 | Os03g0353300 | - | Detail |
| C2H3g21766 | 3:11,897,409-11,897,645 | - | C1H3g12995 | CX3g027651 | LOC_Os03g23000 | Os03g0353333 | - | Detail |
| C2H3g01500 | 3:11,902,339-11,903,507 | + | C1H3g26840 | CX3g026671 | LOC_Os03g23010 | Os03g0353400 | - | Detail |
| C2H3g07846 | 3:11,907,459-11,909,361 | + | C1H3g22809 | CX3g029165 | LOC_Os03g23020 | Os03g0353500 | - | Detail |
| C2H3g26280 | 3:11,910,520-11,925,731 | + | C1H3g12732 | CX3g029602 | LOC_Os03g23030 | Os03g0353600 | OsAPT1 | Detail |
| C2H3g03041 | 3:11,929,416-11,930,867 | - | C1H3g22495 | CX3g029597 | LOC_Os03g23920 | Os03g0355300 | - | Detail |
| C2H3g25328 | 3:11,932,504-11,937,502 | + | C1H3g01916 | CX3g025017 | LOC_Os03g23935 | Os03g0355200 | - | Detail |
| C2H3g07529 | 3:11,939,830-11,940,795 | + | - | CX3g027961 | LOC_Os03g23940 | Os03g0355500 | - | Detail |
| C2H3g10284 | 3:11,941,275-11,947,568 | - | C1H3g22764 | CX3g025703 | LOC_Os03g23950 | Os03g0355600 | - | Detail |
| C2H3g06071 | 3:11,956,108-11,959,620 | + | C1H3g05770 | CX3g031073 | LOC_Os03g23960 | Os03g0355700 | - | Detail |
| C2H3g19901 | 3:11,960,275-11,962,367 | - | C1H3g06132 | CX3g030920 | LOC_Os03g23970 | Os03g0355800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006987 | 1:4,765,008-4,767,612 | - | C1H1g26995 | C2H1g11537 | LOC_Os01g10290 | Os01g0200000 | - | Detail |
| CX1g003266 | 1:4,778,278-4,778,790 | + | C1H1g07163 | C2H1g04474 | LOC_Os01g10310 | Os01g0200200 | - | Detail |
| CX1g001960 | 1:4,781,046-4,785,758 | - | C1H1g07309 | C2H1g25742 | LOC_Os01g10320 | Os01g0200300 | OsHB5 | Detail |
| CX1g004279 | 1:4,789,889-4,796,499 | - | C1H1g18253 | C2H1g13754 | LOC_Os01g10340 | Os01g0200400 | - | Detail |
| CX1g005266 | 1:4,796,820-4,799,724 | + | C1H1g19440 | C2H1g05709 | LOC_Os01g10350 | Os01g0200500 | - | Detail |
| CX1g001261 | 1:4,807,494-4,808,363 | - | C1H1g08378 | C2H1g21530 | LOC_Os01g10370 | Os01g0200600 | - | Detail |
| CX1g001606 | 1:4,808,626-4,808,874 | + | - | - | - | - | - | Detail |
| CX1g000013 | 1:4,826,286-4,832,034 | + | C1H1g30875 | C2H1g28750 | LOC_Os01g10430 | Os01g0201000 | - | Detail |
| CX1g006358 | 1:4,840,837-4,842,481 | + | C1H1g18217 | C2H1g28750 | LOC_Os01g10440 | Os01g0201100 | - | Detail |
| CX1g000033 | 1:4,844,234-4,846,435 | - | C1H1g30064 | C2H1g25446 | LOC_Os01g10450 | Os01g0201200 | - | Detail |
| CX1g006703 | 1:4,851,482-4,851,706 | - | - | C2H1g26595 | - | - | - | Detail |
| CX1g002489 | 1:4,863,838-4,864,473 | - | - | C2H1g20579 | - | Os01g0201250 | - | Detail |
| CX1g004892 | 1:4,863,959-4,864,516 | + | - | - | LOC_Os01g10460 | Os01g0201275 | - | Detail |
| CX1g004123 | 1:4,868,479-4,868,649 | - | - | - | - | - | - | Detail |
| CX1g002514 | 1:4,871,983-4,872,162 | - | - | - | - | - | - | Detail |
| CX1g000926 | 1:4,873,552-4,873,995 | - | - | C2H1g12275 | LOC_Os01g10470 | Os01g0201400 | OsRALF17 | Detail |
| CX1g002271 | 1:4,876,766-4,877,651 | - | C1H1g16523 | C2H1g03634 | LOC_Os01g10480 | Os01g0201500 | - | Detail |
| CX1g003008 | 1:4,882,958-4,884,049 | - | C1H1g23585 | C2H1g24699 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| CX1g000858 | 1:4,889,955-4,890,119 | - | - | - | - | - | - | Detail |
| CX1g006928 | 1:4,893,559-4,902,077 | - | C1H1g15606 | C2H1g12459 | LOC_Os01g10504 | Os01g0201700 | RAG, MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1 | Detail |