| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g26945 | 2:24,576,985-24,577,472 | + | C1H2g31729 | CX2g019808 | LOC_Os02g43710 | Os02g0654000 | - | Detail |
| C2H2g01355 | 2:24,577,767-24,580,584 | + | C1H2g31729 | CX2g019808 | LOC_Os02g43710 | Os02g0654000 | - | Detail |
| C2H2g03929 | 2:24,581,052-24,583,845 | + | C1H2g31729 | CX2g019808 | LOC_Os02g43720 | Os02g0654100 | - | Detail |
| C2H2g25436 | 2:24,587,365-24,590,870 | + | C1H2g10669 | CX2g019259 | LOC_Os02g43740 | Os02g0654300 | OsAGC5 | Detail |
| C2H2g16227 | 2:24,590,847-24,597,698 | - | C1H2g01240 | CX2g021214 | LOC_Os02g43750 | Os02g0654400 | - | Detail |
| C2H2g29983 | 2:24,602,009-24,606,273 | + | C1H2g30250 | CX2g019845 | LOC_Os02g43760 | Os02g0654500 | OsUCH3 | Detail |
| C2H2g23814 | 2:24,607,048-24,609,126 | - | C1H2g07140 | CX2g019074 | LOC_Os02g43770 | Os02g0654600 | - | Detail |
| C2H2g09844 | 2:24,615,466-24,616,386 | - | C1H2g23870 | CX2g019463 | LOC_Os02g43790 | Os02g0654700 | ERF91, OsERF#091, OsERF091, OsERF91, AP59, OsAP59, AP2/EREBP#147, AP2/EREBP147, OsBIERF3, BIERF3 | Detail |
| C2H2g23602 | 2:24,619,550-24,621,511 | + | C1H2g15432 | CX2g019925 | LOC_Os02g43810 | Os02g0655100 | - | Detail |
| C2H2g05194 | 2:24,630,331-24,631,377 | + | C1H2g01941 | CX2g022981 | LOC_Os02g43820 | Os02g0655200 | ERF95, OsERF#095, OsSta2 | Detail |
| C2H2g06967 | 2:24,641,747-24,642,589 | - | C1H2g19564 | CX2g023444 | LOC_Os02g43830 | Os02g0655300 | - | Detail |
| C2H2g00346 | 2:24,645,778-24,647,847 | + | C1H2g25318 | CX4g033458 | LOC_Os02g43840 | Os02g0655500 | - | Detail |
| C2H2g05782 | 2:24,650,743-24,654,782 | - | C1H2g04583 | CX2g022031 | LOC_Os02g43850 | Os02g0655600 | - | Detail |
| C2H2g06716 | 2:24,659,454-24,659,723 | + | C1H1g16487 | CX2g022437 | LOC_Os10g02680 | Os10g0116300 | - | Detail |
| C2H2g15593 | 2:24,664,625-24,668,462 | + | C1H2g12579 | CX2g021119 | LOC_Os02g43860 | Os02g0655700 | - | Detail |
| C2H2g04524 | 2:24,670,323-24,670,769 | - | C1H2g18315 | CX2g020362 | LOC_Os02g43865 | Os02g0655750 | - | Detail |
| C2H2g17063 | 2:24,671,213-24,674,419 | - | C1H2g03124 | CX2g023774 | LOC_Os02g43870 | Os02g0655800 | - | Detail |
| C2H2g08805 | 2:24,678,142-24,678,448 | - | C1H2g01085 | - | - | - | - | Detail |
| C2H2g21079 | 2:24,678,455-24,679,408 | - | C1H2g19219 | CX2g021832 | LOC_Os02g43900 | Os02g0656100 | - | Detail |
| C2H2g20194 | 2:24,681,264-24,692,296 | - | C1H2g14804 | CX2g022474 | LOC_Os02g43906 | Os02g0656200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006987 | 1:4,765,008-4,767,612 | - | C1H1g26995 | C2H1g11537 | LOC_Os01g10290 | Os01g0200000 | - | Detail |
| CX1g003266 | 1:4,778,278-4,778,790 | + | C1H1g07163 | C2H1g04474 | LOC_Os01g10310 | Os01g0200200 | - | Detail |
| CX1g001960 | 1:4,781,046-4,785,758 | - | C1H1g07309 | C2H1g25742 | LOC_Os01g10320 | Os01g0200300 | OsHB5 | Detail |
| CX1g004279 | 1:4,789,889-4,796,499 | - | C1H1g18253 | C2H1g13754 | LOC_Os01g10340 | Os01g0200400 | - | Detail |
| CX1g005266 | 1:4,796,820-4,799,724 | + | C1H1g19440 | C2H1g05709 | LOC_Os01g10350 | Os01g0200500 | - | Detail |
| CX1g001261 | 1:4,807,494-4,808,363 | - | C1H1g08378 | C2H1g21530 | LOC_Os01g10370 | Os01g0200600 | - | Detail |
| CX1g001606 | 1:4,808,626-4,808,874 | + | - | - | - | - | - | Detail |
| CX1g000013 | 1:4,826,286-4,832,034 | + | C1H1g30875 | C2H1g28750 | LOC_Os01g10430 | Os01g0201000 | - | Detail |
| CX1g006358 | 1:4,840,837-4,842,481 | + | C1H1g18217 | C2H1g28750 | LOC_Os01g10440 | Os01g0201100 | - | Detail |
| CX1g000033 | 1:4,844,234-4,846,435 | - | C1H1g30064 | C2H1g25446 | LOC_Os01g10450 | Os01g0201200 | - | Detail |
| CX1g006703 | 1:4,851,482-4,851,706 | - | - | C2H1g26595 | - | - | - | Detail |
| CX1g002489 | 1:4,863,838-4,864,473 | - | - | C2H1g20579 | - | Os01g0201250 | - | Detail |
| CX1g004892 | 1:4,863,959-4,864,516 | + | - | - | LOC_Os01g10460 | Os01g0201275 | - | Detail |
| CX1g004123 | 1:4,868,479-4,868,649 | - | - | - | - | - | - | Detail |
| CX1g002514 | 1:4,871,983-4,872,162 | - | - | - | - | - | - | Detail |
| CX1g000926 | 1:4,873,552-4,873,995 | - | - | C2H1g12275 | LOC_Os01g10470 | Os01g0201400 | OsRALF17 | Detail |
| CX1g002271 | 1:4,876,766-4,877,651 | - | C1H1g16523 | C2H1g03634 | LOC_Os01g10480 | Os01g0201500 | - | Detail |
| CX1g003008 | 1:4,882,958-4,884,049 | - | C1H1g23585 | C2H1g24699 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| CX1g000858 | 1:4,889,955-4,890,119 | - | - | - | - | - | - | Detail |
| CX1g006928 | 1:4,893,559-4,902,077 | - | C1H1g15606 | C2H1g12459 | LOC_Os01g10504 | Os01g0201700 | RAG, MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1 | Detail |