| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g14354 | 2:19,784,929-19,785,165 | + | C1H2g09389 | - | - | - | - | Detail |
| C2H2g12148 | 2:19,786,045-19,789,305 | + | C1H2g08637 | CX2g020150 | LOC_Os02g34830 | Os02g0553500 | - | Detail |
| C2H2g01733 | 2:19,791,366-19,793,147 | + | C1H2g26060 | CX2g021020 | LOC_Os02g34840 | Os02g0553600 | - | Detail |
| C2H2g02626 | 2:19,803,188-19,816,975 | + | C1H2g16138 | CX2g022480 | LOC_Os02g34850 | Os02g0554000 | SDG725 | Detail |
| C2H2g19545 | 2:19,821,930-19,827,618 | + | C1H2g19627 | CX2g024528 | LOC_Os02g34860 | Os02g0554100 | - | Detail |
| C2H2g06775 | 2:19,830,134-19,844,577 | - | C1H2g18794 | CX2g020839 | LOC_Os02g34884 | Os02g0554300 | GH1 | Detail |
| C2H2g25302 | 2:19,856,162-19,860,514 | - | C1H2g10952 | CX2g019829 | LOC_Os02g34940 | Os02g0554900 | - | Detail |
| C2H2g15722 | 2:19,861,908-19,864,847 | - | C1H2g26487 | CX2g020204 | LOC_Os02g34950 | Os02g0555000 | - | Detail |
| C2H2g16732 | 2:19,866,855-19,867,227 | - | C1H2g14187 | - | - | - | - | Detail |
| C2H2g20499 | 2:19,868,697-19,869,441 | - | C1H2g06862 | - | - | Os02g0555200 | - | Detail |
| C2H2g29653 | 2:19,871,355-19,872,175 | + | C1H2g01665 | CX2g024213 | LOC_Os02g34970 | Os02g0555300 | NAC028 | Detail |
| C2H2g29738 | 2:19,890,246-19,893,648 | + | C1H2g11878 | CX2g024461 | LOC_Os02g34990 | Os02g0555600 | - | Detail |
| C2H2g07415 | 2:19,894,486-19,897,956 | - | C1H2g01867 | CX2g022003 | LOC_Os02g35000 | Os02g0555700 | - | Detail |
| C2H2g17028 | 2:19,904,671-19,910,963 | - | C1H2g16690 | CX2g024240 | LOC_Os02g35010 | Os02g0555900 | - | Detail |
| C2H2g28137 | 2:19,917,004-19,921,815 | - | C1H2g29141 | CX2g024007 | LOC_Os02g35020 | Os02g0556000 | - | Detail |
| C2H2g11684 | 2:19,930,689-19,938,038 | + | C1H2g14041 | CX2g020938 | LOC_Os02g35039 | Os02g0556100 | - | Detail |
| C2H2g16395 | 2:19,939,314-19,942,036 | - | C1H2g15959 | CX2g020681 | LOC_Os02g35060 | Os02g0556400 | - | Detail |
| C2H2g15584 | 2:19,943,211-19,949,725 | - | - | CX2g021510 | LOC_Os02g35070 | Os02g0556600 | - | Detail |
| C2H2g29862 | 2:19,952,910-19,958,695 | + | C1H2g14953 | CX2g020225 | LOC_Os02g35080 | Os02g0556700 | - | Detail |
| C2H2g08339 | 2:19,958,803-19,959,927 | - | C1H2g02257 | CX2g023638 | LOC_Os02g35090 | Os02g0556800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006987 | 1:4,765,008-4,767,612 | - | C1H1g26995 | C2H1g11537 | LOC_Os01g10290 | Os01g0200000 | - | Detail |
| CX1g003266 | 1:4,778,278-4,778,790 | + | C1H1g07163 | C2H1g04474 | LOC_Os01g10310 | Os01g0200200 | - | Detail |
| CX1g001960 | 1:4,781,046-4,785,758 | - | C1H1g07309 | C2H1g25742 | LOC_Os01g10320 | Os01g0200300 | OsHB5 | Detail |
| CX1g004279 | 1:4,789,889-4,796,499 | - | C1H1g18253 | C2H1g13754 | LOC_Os01g10340 | Os01g0200400 | - | Detail |
| CX1g005266 | 1:4,796,820-4,799,724 | + | C1H1g19440 | C2H1g05709 | LOC_Os01g10350 | Os01g0200500 | - | Detail |
| CX1g001261 | 1:4,807,494-4,808,363 | - | C1H1g08378 | C2H1g21530 | LOC_Os01g10370 | Os01g0200600 | - | Detail |
| CX1g001606 | 1:4,808,626-4,808,874 | + | - | - | - | - | - | Detail |
| CX1g000013 | 1:4,826,286-4,832,034 | + | C1H1g30875 | C2H1g28750 | LOC_Os01g10430 | Os01g0201000 | - | Detail |
| CX1g006358 | 1:4,840,837-4,842,481 | + | C1H1g18217 | C2H1g28750 | LOC_Os01g10440 | Os01g0201100 | - | Detail |
| CX1g000033 | 1:4,844,234-4,846,435 | - | C1H1g30064 | C2H1g25446 | LOC_Os01g10450 | Os01g0201200 | - | Detail |
| CX1g006703 | 1:4,851,482-4,851,706 | - | - | C2H1g26595 | - | - | - | Detail |
| CX1g002489 | 1:4,863,838-4,864,473 | - | - | C2H1g20579 | - | Os01g0201250 | - | Detail |
| CX1g004892 | 1:4,863,959-4,864,516 | + | - | - | LOC_Os01g10460 | Os01g0201275 | - | Detail |
| CX1g004123 | 1:4,868,479-4,868,649 | - | - | - | - | - | - | Detail |
| CX1g002514 | 1:4,871,983-4,872,162 | - | - | - | - | - | - | Detail |
| CX1g000926 | 1:4,873,552-4,873,995 | - | - | C2H1g12275 | LOC_Os01g10470 | Os01g0201400 | OsRALF17 | Detail |
| CX1g002271 | 1:4,876,766-4,877,651 | - | C1H1g16523 | C2H1g03634 | LOC_Os01g10480 | Os01g0201500 | - | Detail |
| CX1g003008 | 1:4,882,958-4,884,049 | - | C1H1g23585 | C2H1g24699 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| CX1g000858 | 1:4,889,955-4,890,119 | - | - | - | - | - | - | Detail |
| CX1g006928 | 1:4,893,559-4,902,077 | - | C1H1g15606 | C2H1g12459 | LOC_Os01g10504 | Os01g0201700 | RAG, MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1 | Detail |