| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g24841 | 2:4,466,333-4,473,590 | + | C1H2g06273 | - | - | - | - | Detail |
| C2H2g02506 | 2:4,467,459-4,475,507 | - | C1H2g06467 | CX2g022600 | LOC_Os02g09720 | Os02g0189800 | - | Detail |
| C2H2g14951 | 2:4,478,174-4,480,674 | - | C1H2g01542 | - | - | - | - | Detail |
| C2H2g30372 | 2:4,496,908-4,505,951 | + | C1H2g30083 | - | - | Os02g0189900 | - | Detail |
| C2H2g18329 | 2:4,499,651-4,501,987 | - | C1H2g16474 | CX2g021632 | LOC_Os02g09720 | Os02g0190000 | - | Detail |
| C2H2g16945 | 2:4,505,076-4,507,325 | - | C1H2g04187 | CX2g021192 | LOC_Os02g09720 | Os02g0190000 | - | Detail |
| C2H2g22278 | 2:4,513,353-4,514,216 | + | C1H2g07631 | - | LOC_Os02g09710 | Os02g0190100 | - | Detail |
| C2H2g08799 | 2:4,514,878-4,515,210 | - | C1H2g15671 | CX2g022648 | - | - | - | Detail |
| C2H2g23933 | 2:4,518,660-4,528,120 | - | C1H2g04187 | CX2g021192 | LOC_Os02g09720 | Os02g0190300 | - | Detail |
| C2H2g06769 | 2:4,552,603-4,558,573 | + | C1H2g21943 | CX2g022054 | LOC_Os02g09740 | Os02g0190500 | - | Detail |
| C2H2g16178 | 2:4,564,198-4,564,776 | - | C1H2g15779 | CX2g023142 | LOC_Os02g09760 | Os02g0190700 | - | Detail |
| C2H2g05420 | 2:4,572,781-4,576,587 | - | C1H2g04808 | CX2g021348 | LOC_Os02g09770 | Os02g0190800 | - | Detail |
| C2H2g18343 | 2:4,578,985-4,580,410 | - | C1H2g13385 | CX2g020459 | LOC_Os02g09780 | Os02g0190900 | - | Detail |
| C2H2g21825 | 2:4,600,410-4,600,900 | - | - | - | - | Os02g0191250 | - | Detail |
| C2H2g19527 | 2:4,605,121-4,608,898 | - | C1H2g16598 | CX2g019369 | LOC_Os02g09810 | Os02g0191300 | OsATL6 | Detail |
| C2H2g07551 | 2:4,611,094-4,613,404 | + | C1H2g02472 | CX2g021648 | LOC_Os02g09820 | Os02g0191500 | - | Detail |
| C2H2g25953 | 2:4,619,166-4,622,606 | - | C1H2g12750 | CX2g024871 | LOC_Os02g09840 | Os02g0191700 | - | Detail |
| C2H2g20717 | 2:4,671,796-4,674,961 | - | C1H2g08390 | CX2g018975 | LOC_Os02g09890 | Os02g0192100 | - | Detail |
| C2H2g09261 | 2:4,674,811-4,680,161 | + | C1H2g01762 | - | - | - | - | Detail |
| C2H2g06391 | 2:4,689,950-4,701,925 | + | C1H2g02906 | CX2g023082 | LOC_Os02g09920 | Os02g0192400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006987 | 1:4,765,008-4,767,612 | - | C1H1g26995 | C2H1g11537 | LOC_Os01g10290 | Os01g0200000 | - | Detail |
| CX1g003266 | 1:4,778,278-4,778,790 | + | C1H1g07163 | C2H1g04474 | LOC_Os01g10310 | Os01g0200200 | - | Detail |
| CX1g001960 | 1:4,781,046-4,785,758 | - | C1H1g07309 | C2H1g25742 | LOC_Os01g10320 | Os01g0200300 | OsHB5 | Detail |
| CX1g004279 | 1:4,789,889-4,796,499 | - | C1H1g18253 | C2H1g13754 | LOC_Os01g10340 | Os01g0200400 | - | Detail |
| CX1g005266 | 1:4,796,820-4,799,724 | + | C1H1g19440 | C2H1g05709 | LOC_Os01g10350 | Os01g0200500 | - | Detail |
| CX1g001261 | 1:4,807,494-4,808,363 | - | C1H1g08378 | C2H1g21530 | LOC_Os01g10370 | Os01g0200600 | - | Detail |
| CX1g001606 | 1:4,808,626-4,808,874 | + | - | - | - | - | - | Detail |
| CX1g000013 | 1:4,826,286-4,832,034 | + | C1H1g30875 | C2H1g28750 | LOC_Os01g10430 | Os01g0201000 | - | Detail |
| CX1g006358 | 1:4,840,837-4,842,481 | + | C1H1g18217 | C2H1g28750 | LOC_Os01g10440 | Os01g0201100 | - | Detail |
| CX1g000033 | 1:4,844,234-4,846,435 | - | C1H1g30064 | C2H1g25446 | LOC_Os01g10450 | Os01g0201200 | - | Detail |
| CX1g006703 | 1:4,851,482-4,851,706 | - | - | C2H1g26595 | - | - | - | Detail |
| CX1g002489 | 1:4,863,838-4,864,473 | - | - | C2H1g20579 | - | Os01g0201250 | - | Detail |
| CX1g004892 | 1:4,863,959-4,864,516 | + | - | - | LOC_Os01g10460 | Os01g0201275 | - | Detail |
| CX1g004123 | 1:4,868,479-4,868,649 | - | - | - | - | - | - | Detail |
| CX1g002514 | 1:4,871,983-4,872,162 | - | - | - | - | - | - | Detail |
| CX1g000926 | 1:4,873,552-4,873,995 | - | - | C2H1g12275 | LOC_Os01g10470 | Os01g0201400 | OsRALF17 | Detail |
| CX1g002271 | 1:4,876,766-4,877,651 | - | C1H1g16523 | C2H1g03634 | LOC_Os01g10480 | Os01g0201500 | - | Detail |
| CX1g003008 | 1:4,882,958-4,884,049 | - | C1H1g23585 | C2H1g24699 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| CX1g000858 | 1:4,889,955-4,890,119 | - | - | - | - | - | - | Detail |
| CX1g006928 | 1:4,893,559-4,902,077 | - | C1H1g15606 | C2H1g12459 | LOC_Os01g10504 | Os01g0201700 | RAG, MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1 | Detail |