| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g26274 | 5:18,195,660-18,197,946 | + | C2H5g29386 | CX5g040546 | LOC_Os05g37970 | Os05g0453700 | - | Detail |
| C1H5g07445 | 5:18,200,093-18,201,648 | + | C2H5g27459 | CX5g040837 | LOC_Os05g37980 | Os05g0453900 | - | Detail |
| C1H5g30122 | 5:18,212,029-18,215,684 | + | C2H5g19582 | CX5g040688 | LOC_Os05g38000 | Os05g0454200 | BGL, OsRopGEF10, bgl | Detail |
| C1H5g01080 | 5:18,217,525-18,218,997 | + | C2H5g21438 | CX5g041054 | LOC_Os05g38020 | Os05g0454400 | - | Detail |
| C1H5g19287 | 5:18,227,660-18,230,965 | - | C2H5g23403 | CX5g039936 | LOC_Os05g38040 | Os05g0454500 | - | Detail |
| C1H5g24205 | 5:18,266,672-18,267,028 | + | - | - | - | - | - | Detail |
| C1H5g02292 | 5:18,267,267-18,271,453 | + | C2H5g21423 | CX5g038338 | LOC_Os05g38120 | Os05g0455200 | - | Detail |
| C1H5g18222 | 5:18,283,216-18,284,862 | + | C2H5g21494 | CX5g037653 | LOC_Os05g38140 | Os05g0455400 | OsbHLH58, OsPRI2 | Detail |
| C1H5g05465 | 5:18,285,788-18,292,497 | - | C2H5g15588 | CX5g038237 | LOC_Os05g38150 | Os05g0455500 | P5CS2, OsP5CS1 | Detail |
| C1H5g03707 | 5:18,296,432-18,299,404 | + | C2H5g29702 | CX5g039333 | LOC_Os05g38160 | Os05g0455600 | - | Detail |
| C1H5g15257 | 5:18,300,029-18,304,480 | - | C2H5g07721 | CX5g036880 | LOC_Os05g38170 | Os05g0455700 | - | Detail |
| C1H5g24331 | 5:18,305,712-18,309,448 | + | C2H5g09326 | CX5g039124 | LOC_Os05g38180 | Os05g0455800 | - | Detail |
| C1H5g20708 | 5:18,310,799-18,313,423 | + | C2H5g22995 | CX5g039226 | LOC_Os05g38190 | Os05g0455900 | - | Detail |
| C1H5g20913 | 5:18,322,205-18,323,876 | - | C2H5g06077 | CX5g038180 | LOC_Os05g38210 | Os05g0456000 | - | Detail |
| C1H5g23637 | 5:18,324,706-18,326,558 | - | C2H5g16890 | CX5g039970 | LOC_Os05g38230 | Os05g0456200 | - | Detail |
| C1H5g01651 | 5:18,327,564-18,332,013 | - | C2H5g05222 | CX5g039970 | LOC_Os05g38230 | Os05g0456300 | - | Detail |
| C1H5g29090 | 5:18,339,277-18,340,954 | + | C2H5g21931 | CX5g040017 | LOC_Os05g38250 | Os05g0456500 | - | Detail |
| C1H5g21162 | 5:18,343,371-18,343,595 | + | C2H5g10230 | - | - | Os05g0456800 | - | Detail |
| C1H5g00525 | 5:18,344,398-18,344,670 | - | C2H5g17856 | CX5g039920 | LOC_Os05g38264 | Os05g0456900 | - | Detail |
| C1H5g05737 | 5:18,352,057-18,356,484 | - | C2H5g16298 | CX5g038189 | LOC_Os05g38270 | Os05g0456925 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006987 | 1:4,765,008-4,767,612 | - | C1H1g26995 | C2H1g11537 | LOC_Os01g10290 | Os01g0200000 | - | Detail |
| CX1g003266 | 1:4,778,278-4,778,790 | + | C1H1g07163 | C2H1g04474 | LOC_Os01g10310 | Os01g0200200 | - | Detail |
| CX1g001960 | 1:4,781,046-4,785,758 | - | C1H1g07309 | C2H1g25742 | LOC_Os01g10320 | Os01g0200300 | OsHB5 | Detail |
| CX1g004279 | 1:4,789,889-4,796,499 | - | C1H1g18253 | C2H1g13754 | LOC_Os01g10340 | Os01g0200400 | - | Detail |
| CX1g005266 | 1:4,796,820-4,799,724 | + | C1H1g19440 | C2H1g05709 | LOC_Os01g10350 | Os01g0200500 | - | Detail |
| CX1g001261 | 1:4,807,494-4,808,363 | - | C1H1g08378 | C2H1g21530 | LOC_Os01g10370 | Os01g0200600 | - | Detail |
| CX1g001606 | 1:4,808,626-4,808,874 | + | - | - | - | - | - | Detail |
| CX1g000013 | 1:4,826,286-4,832,034 | + | C1H1g30875 | C2H1g28750 | LOC_Os01g10430 | Os01g0201000 | - | Detail |
| CX1g006358 | 1:4,840,837-4,842,481 | + | C1H1g18217 | C2H1g28750 | LOC_Os01g10440 | Os01g0201100 | - | Detail |
| CX1g000033 | 1:4,844,234-4,846,435 | - | C1H1g30064 | C2H1g25446 | LOC_Os01g10450 | Os01g0201200 | - | Detail |
| CX1g006703 | 1:4,851,482-4,851,706 | - | - | C2H1g26595 | - | - | - | Detail |
| CX1g002489 | 1:4,863,838-4,864,473 | - | - | C2H1g20579 | - | Os01g0201250 | - | Detail |
| CX1g004892 | 1:4,863,959-4,864,516 | + | - | - | LOC_Os01g10460 | Os01g0201275 | - | Detail |
| CX1g004123 | 1:4,868,479-4,868,649 | - | - | - | - | - | - | Detail |
| CX1g002514 | 1:4,871,983-4,872,162 | - | - | - | - | - | - | Detail |
| CX1g000926 | 1:4,873,552-4,873,995 | - | - | C2H1g12275 | LOC_Os01g10470 | Os01g0201400 | OsRALF17 | Detail |
| CX1g002271 | 1:4,876,766-4,877,651 | - | C1H1g16523 | C2H1g03634 | LOC_Os01g10480 | Os01g0201500 | - | Detail |
| CX1g003008 | 1:4,882,958-4,884,049 | - | C1H1g23585 | C2H1g24699 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| CX1g000858 | 1:4,889,955-4,890,119 | - | - | - | - | - | - | Detail |
| CX1g006928 | 1:4,893,559-4,902,077 | - | C1H1g15606 | C2H1g12459 | LOC_Os01g10504 | Os01g0201700 | RAG, MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1 | Detail |