| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g04299 | 2:32,248,397-32,250,127 | + | C2H2g23576 | CX2g023799 | LOC_Os02g57600 | Os02g0821900 | - | Detail |
| C1H2g02977 | 2:32,252,650-32,256,809 | + | C2H2g14935 | CX2g023493 | LOC_Os02g57610 | Os02g0822000 | - | Detail |
| C1H2g30345 | 2:32,260,845-32,265,351 | + | C2H2g30134 | CX2g020357 | LOC_Os02g57620 | Os02g0822100 | - | Detail |
| C1H2g25628 | 2:32,266,886-32,269,855 | + | C2H2g03095 | CX2g019104 | LOC_Os02g57630 | Os02g0822200 | - | Detail |
| C1H2g09063 | 2:32,270,849-32,280,276 | + | C2H2g18732 | CX2g022663 | LOC_Os02g57640 | Os02g0822400 | - | Detail |
| C1H2g06679 | 2:32,276,570-32,277,916 | - | - | - | - | Os02g0822450 | - | Detail |
| C1H2g16867 | 2:32,280,422-32,286,503 | - | C2H2g23770 | CX2g023127 | LOC_Os02g57660 | Os02g0822500 | - | Detail |
| C1H2g06317 | 2:32,293,393-32,296,062 | - | C2H2g22421 | CX2g024897 | LOC_Os02g57670 | Os02g0822600 | - | Detail |
| C1H2g08984 | 2:32,298,750-32,305,910 | - | C2H2g22113 | CX2g022012 | LOC_Os02g57690 | Os02g0822800 | - | Detail |
| C1H2g22600 | 2:32,310,560-32,316,035 | + | C2H2g05316 | CX2g022723 | LOC_Os02g57700 | Os02g0822900 | - | Detail |
| C1H2g03991 | 2:32,317,549-32,323,100 | + | C2H2g07565 | CX2g023366 | LOC_Os02g57710 | Os02g0823000 | - | Detail |
| C1H2g18559 | 2:32,324,559-32,326,268 | + | C2H2g14434 | CX2g019966 | LOC_Os02g57720 | Os02g0823100 | OsPIP1;3 | Detail |
| C1H2g23231 | 2:32,328,009-32,332,174 | + | C2H2g30480 | CX2g023177 | LOC_Os02g57740 | Os02g0823200 | - | Detail |
| C1H2g28675 | 2:32,338,291-32,344,309 | + | C2H2g28739 | CX2g024739 | LOC_Os02g57750 | Os02g0823300 | - | Detail |
| C1H2g07473 | 2:32,346,004-32,352,491 | + | C2H2g20143 | CX2g021224 | LOC_Os02g57760 | Os02g0823400 | COMT2 | Detail |
| C1H2g07620 | 2:32,352,469-32,354,321 | - | C2H2g30514 | CX2g021746 | - | Os02g0823600 | - | Detail |
| C1H2g27003 | 2:32,355,051-32,357,178 | - | C2H2g01115 | CX2g020179 | LOC_Os02g57770 | Os02g0823700 | - | Detail |
| C1H2g28434 | 2:32,357,633-32,363,408 | + | C2H2g11155 | CX2g021167 | LOC_Os02g57780 | Os02g0823800 | - | Detail |
| C1H2g23852 | 2:32,395,513-32,399,755 | - | C2H2g15228 | CX2g022643 | LOC_Os02g57820 | Os02g0824300 | OsAHL5 | Detail |
| C1H2g22363 | 2:32,402,008-32,403,854 | - | C2H2g10963 | - | LOC_Os02g57830 | Os02g0824400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006987 | 1:4,765,008-4,767,612 | - | C1H1g26995 | C2H1g11537 | LOC_Os01g10290 | Os01g0200000 | - | Detail |
| CX1g003266 | 1:4,778,278-4,778,790 | + | C1H1g07163 | C2H1g04474 | LOC_Os01g10310 | Os01g0200200 | - | Detail |
| CX1g001960 | 1:4,781,046-4,785,758 | - | C1H1g07309 | C2H1g25742 | LOC_Os01g10320 | Os01g0200300 | OsHB5 | Detail |
| CX1g004279 | 1:4,789,889-4,796,499 | - | C1H1g18253 | C2H1g13754 | LOC_Os01g10340 | Os01g0200400 | - | Detail |
| CX1g005266 | 1:4,796,820-4,799,724 | + | C1H1g19440 | C2H1g05709 | LOC_Os01g10350 | Os01g0200500 | - | Detail |
| CX1g001261 | 1:4,807,494-4,808,363 | - | C1H1g08378 | C2H1g21530 | LOC_Os01g10370 | Os01g0200600 | - | Detail |
| CX1g001606 | 1:4,808,626-4,808,874 | + | - | - | - | - | - | Detail |
| CX1g000013 | 1:4,826,286-4,832,034 | + | C1H1g30875 | C2H1g28750 | LOC_Os01g10430 | Os01g0201000 | - | Detail |
| CX1g006358 | 1:4,840,837-4,842,481 | + | C1H1g18217 | C2H1g28750 | LOC_Os01g10440 | Os01g0201100 | - | Detail |
| CX1g000033 | 1:4,844,234-4,846,435 | - | C1H1g30064 | C2H1g25446 | LOC_Os01g10450 | Os01g0201200 | - | Detail |
| CX1g006703 | 1:4,851,482-4,851,706 | - | - | C2H1g26595 | - | - | - | Detail |
| CX1g002489 | 1:4,863,838-4,864,473 | - | - | C2H1g20579 | - | Os01g0201250 | - | Detail |
| CX1g004892 | 1:4,863,959-4,864,516 | + | - | - | LOC_Os01g10460 | Os01g0201275 | - | Detail |
| CX1g004123 | 1:4,868,479-4,868,649 | - | - | - | - | - | - | Detail |
| CX1g002514 | 1:4,871,983-4,872,162 | - | - | - | - | - | - | Detail |
| CX1g000926 | 1:4,873,552-4,873,995 | - | - | C2H1g12275 | LOC_Os01g10470 | Os01g0201400 | OsRALF17 | Detail |
| CX1g002271 | 1:4,876,766-4,877,651 | - | C1H1g16523 | C2H1g03634 | LOC_Os01g10480 | Os01g0201500 | - | Detail |
| CX1g003008 | 1:4,882,958-4,884,049 | - | C1H1g23585 | C2H1g24699 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| CX1g000858 | 1:4,889,955-4,890,119 | - | - | - | - | - | - | Detail |
| CX1g006928 | 1:4,893,559-4,902,077 | - | C1H1g15606 | C2H1g12459 | LOC_Os01g10504 | Os01g0201700 | RAG, MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1 | Detail |