| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g14094 | 2:20,288,259-20,291,056 | - | C2H2g05354 | CX2g021611 | LOC_Os02g35660 | Os02g0564700 | - | Detail |
| C1H2g29150 | 2:20,303,400-20,305,571 | - | C2H2g05418 | CX2g020663 | LOC_Os02g35690 | Os02g0565000 | - | Detail |
| C1H2g29731 | 2:20,310,067-20,311,234 | + | C2H2g13608 | CX2g019138 | LOC_Os02g35700 | Os02g0565100 | - | Detail |
| C1H2g18157 | 2:20,319,464-20,321,431 | - | C2H2g29068 | CX2g020892 | LOC_Os02g35720 | Os02g0565200 | - | Detail |
| C1H2g08838 | 2:20,328,712-20,331,796 | + | C2H2g29701 | CX2g020114 | LOC_Os02g35750 | Os02g0565400 | - | Detail |
| C1H2g01184 | 2:20,332,178-20,334,014 | - | C2H2g00307 | CX2g020816 | LOC_Os02g35760 | Os02g0565500 | - | Detail |
| C1H2g26447 | 2:20,343,643-20,345,603 | - | C2H2g11368 | CX2g023962 | LOC_Os02g35770 | Os02g0565600 | - | Detail |
| C1H2g22635 | 2:20,364,007-20,367,020 | + | C2H2g01236 | CX2g023721 | LOC_Os02g35830 | Os02g0566400 | - | Detail |
| C1H2g20936 | 2:20,367,488-20,371,064 | - | C2H2g17118 | CX2g020597 | LOC_Os02g35840 | Os02g0566500 | - | Detail |
| C1H2g18346 | 2:20,380,446-20,384,212 | + | C2H2g10396 | CX2g019657 | LOC_Os02g35860 | Os02g0566700 | - | Detail |
| C1H2g31202 | 2:20,385,103-20,390,301 | - | C2H2g21221 | CX2g023157 | LOC_Os02g35870 | Os02g0566800 | - | Detail |
| C1H2g04600 | 2:20,394,766-20,396,602 | - | C2H2g06664 | CX2g019432 | LOC_Os02g35880 | Os02g0566900 | - | Detail |
| C1H2g02801 | 2:20,398,059-20,399,175 | - | C2H2g11173 | CX2g019739 | LOC_Os02g35890 | Os02g0567000 | - | Detail |
| C1H2g06102 | 2:20,400,872-20,403,937 | - | C2H2g20101 | CX2g020144 | - | - | - | Detail |
| C1H2g22051 | 2:20,404,984-20,407,382 | - | C2H2g12586 | CX2g020262 | LOC_Os02g35900 | Os02g0567100 | - | Detail |
| C1H2g28195 | 2:20,410,375-20,414,381 | - | C2H2g03033 | CX2g024581 | LOC_Os02g35910 | Os02g0567200 | - | Detail |
| C1H2g03936 | 2:20,429,664-20,435,140 | + | C2H2g11531 | CX2g019301 | LOC_Os02g35950 | Os02g0567900 | - | Detail |
| C1H2g08686 | 2:20,439,891-20,444,285 | - | C2H2g17720 | CX2g021378 | LOC_Os02g35970 | Os02g0568200 | CPT1 | Detail |
| C1H2g06762 | 2:20,454,409-20,455,038 | + | C2H2g29773 | CX2g018880 | LOC_Os02g36000 | Os02g0568600 | - | Detail |
| C1H2g26744 | 2:20,458,721-20,461,703 | - | C2H2g07658 | CX2g020624 | LOC_Os02g36020 | Os02g0568700 | OsKSL12 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006987 | 1:4,765,008-4,767,612 | - | C1H1g26995 | C2H1g11537 | LOC_Os01g10290 | Os01g0200000 | - | Detail |
| CX1g003266 | 1:4,778,278-4,778,790 | + | C1H1g07163 | C2H1g04474 | LOC_Os01g10310 | Os01g0200200 | - | Detail |
| CX1g001960 | 1:4,781,046-4,785,758 | - | C1H1g07309 | C2H1g25742 | LOC_Os01g10320 | Os01g0200300 | OsHB5 | Detail |
| CX1g004279 | 1:4,789,889-4,796,499 | - | C1H1g18253 | C2H1g13754 | LOC_Os01g10340 | Os01g0200400 | - | Detail |
| CX1g005266 | 1:4,796,820-4,799,724 | + | C1H1g19440 | C2H1g05709 | LOC_Os01g10350 | Os01g0200500 | - | Detail |
| CX1g001261 | 1:4,807,494-4,808,363 | - | C1H1g08378 | C2H1g21530 | LOC_Os01g10370 | Os01g0200600 | - | Detail |
| CX1g001606 | 1:4,808,626-4,808,874 | + | - | - | - | - | - | Detail |
| CX1g000013 | 1:4,826,286-4,832,034 | + | C1H1g30875 | C2H1g28750 | LOC_Os01g10430 | Os01g0201000 | - | Detail |
| CX1g006358 | 1:4,840,837-4,842,481 | + | C1H1g18217 | C2H1g28750 | LOC_Os01g10440 | Os01g0201100 | - | Detail |
| CX1g000033 | 1:4,844,234-4,846,435 | - | C1H1g30064 | C2H1g25446 | LOC_Os01g10450 | Os01g0201200 | - | Detail |
| CX1g006703 | 1:4,851,482-4,851,706 | - | - | C2H1g26595 | - | - | - | Detail |
| CX1g002489 | 1:4,863,838-4,864,473 | - | - | C2H1g20579 | - | Os01g0201250 | - | Detail |
| CX1g004892 | 1:4,863,959-4,864,516 | + | - | - | LOC_Os01g10460 | Os01g0201275 | - | Detail |
| CX1g004123 | 1:4,868,479-4,868,649 | - | - | - | - | - | - | Detail |
| CX1g002514 | 1:4,871,983-4,872,162 | - | - | - | - | - | - | Detail |
| CX1g000926 | 1:4,873,552-4,873,995 | - | - | C2H1g12275 | LOC_Os01g10470 | Os01g0201400 | OsRALF17 | Detail |
| CX1g002271 | 1:4,876,766-4,877,651 | - | C1H1g16523 | C2H1g03634 | LOC_Os01g10480 | Os01g0201500 | - | Detail |
| CX1g003008 | 1:4,882,958-4,884,049 | - | C1H1g23585 | C2H1g24699 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| CX1g000858 | 1:4,889,955-4,890,119 | - | - | - | - | - | - | Detail |
| CX1g006928 | 1:4,893,559-4,902,077 | - | C1H1g15606 | C2H1g12459 | LOC_Os01g10504 | Os01g0201700 | RAG, MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1 | Detail |