| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g16452 | 3:33,046,539-33,047,911 | - | C1H3g04119 | CX3g031284 | LOC_Os03g64340 | Os03g0861400 | - | Detail |
| C2H3g12472 | 3:33,054,436-33,059,715 | - | C1H3g17429 | CX3g030656 | LOC_Os03g64350 | Os03g0861700 | - | Detail |
| C2H3g08959 | 3:33,059,879-33,062,631 | + | C1H3g24824 | CX3g028909 | LOC_Os03g64360 | Os03g0861800 | - | Detail |
| C2H3g16629 | 3:33,072,868-33,079,793 | + | C1H3g08341 | CX3g029193 | LOC_Os03g64400 | Os03g0862100 | - | Detail |
| C2H3g28738 | 3:33,082,826-33,084,731 | - | - | CX3g027325 | LOC_Os03g64415 | - | - | Detail |
| C2H4g04859 | 4:3,816-6,198 | + | C1H6g20714 | CX6g041752 | LOC_Os06g01840 | Os06g0107600 | - | Detail |
| C2H4g12961 | 4:6,554-8,915 | - | C1H6g26100 | CX6g042457 | LOC_Os06g01850 | Os06g0107700 | OsLFNR2, LFNR2, FNR | Detail |
| C2H4g04026 | 4:11,903-12,487 | - | - | CX6g041557 | LOC_Os06g01860 | Os06g0107800 | BPH29 | Detail |
| C2H4g21175 | 4:18,091-18,357 | + | C1H6g12285 | CX6g042594 | LOC_Os06g01890 | Os06g0108500 | - | Detail |
| C2H4g10486 | 4:20,285-22,820 | + | C1H6g01350 | CX6g042594 | LOC_Os06g01890 | Os06g0108500 | - | Detail |
| C2H4g22338 | 4:23,536-24,372 | - | - | CX6g042160 | LOC_Os06g01920 | Os06g0108600 | - | Detail |
| C2H4g13792 | 4:35,633-38,645 | + | C1H6g04390 | CX6g043309 | LOC_Os06g01934 | - | - | Detail |
| C2H4g26823 | 4:39,446-40,543 | - | - | CX6g041477 | LOC_Os06g01950 | Os06g0109000 | - | Detail |
| C2H4g18764 | 4:42,224-42,691 | - | - | CX6g041174 | LOC_Os06g01960 | Os06g0109100 | - | Detail |
| C2H4g20581 | 4:50,539-52,867 | - | C1H4g20758 | - | - | - | - | Detail |
| C2H4g20979 | 4:57,481-57,976 | - | C1H4g13734 | CX4g036368 | - | - | - | Detail |
| C2H4g12191 | 4:104,764-106,551 | - | C1H4g16035 | - | - | - | - | Detail |
| C2H4g13233 | 4:105,552-108,242 | + | C1H4g00861 | CX4g032894 | LOC_Os04g01070 | Os04g0100300 | - | Detail |
| C2H4g05647 | 4:152,099-161,042 | + | C1H4g00970 | CX4g034809 | LOC_Os04g01130 | Os04g0101300 | - | Detail |
| C2H4g16448 | 4:162,988-164,816 | - | C1H4g04170 | CX4g034027 | LOC_Os04g01140 | Os04g0101400 | CYP93G1, OsCYP93G1, OsFNSII, FNSII | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g008564 | 10:16,628,999-16,632,553 | + | C1H10g13954 | C2H10g12822 | LOC_Os10g34230 | Os10g0483500 | OsCKX3 | Detail |
| CX10g009791 | 10:16,644,602-16,644,784 | - | - | - | - | - | - | Detail |
| CX10g010408 | 10:16,657,759-16,658,553 | - | - | - | - | Os10g0483800 | - | Detail |
| CX10g009969 | 10:16,667,528-16,669,264 | - | C1H10g13856 | C2H10g23958 | LOC_Os10g34310 | Os10g0484300 | - | Detail |
| CX10g009135 | 10:16,678,718-16,680,454 | - | C1H10g13856 | C2H10g26369 | LOC_Os10g34310 | Os10g0484300 | - | Detail |
| CX10g009493 | 10:16,683,170-16,685,289 | - | C1H10g04886 | C2H10g02496 | LOC_Os10g34320 | Os10g0484400 | - | Detail |
| CX10g010255 | 10:16,695,462-16,697,609 | - | C1H10g31452 | C2H10g08079 | LOC_Os10g34350 | Os10g0484700 | - | Detail |
| CX10g009855 | 10:16,701,821-16,703,789 | + | C1H10g27510 | C2H10g06493 | LOC_Os10g34360 | Os10g0484800 | OsLAP6, OsPKS1, OsLAP6/OsPKS1 | Detail |
| CX10g007535 | 10:16,704,593-16,705,879 | - | C1H10g25155 | C2H10g18388 | LOC_Os10g34370 | Os10g0484900 | - | Detail |
| CX10g008242 | 10:16,706,725-16,717,117 | - | C1H10g13522 | C2H10g15008 | LOC_Os10g34380 | Os10g0485000 | - | Detail |
| CX10g008468 | 10:16,718,441-16,725,079 | - | C1H10g15559 | C2H10g15770 | LOC_Os10g34390 | Os10g0485100 | - | Detail |
| CX10g008098 | 10:16,727,214-16,727,651 | - | - | - | - | - | - | Detail |
| CX10g008448 | 10:16,728,551-16,735,830 | + | C1H10g11926 | C2H10g23591 | LOC_Os10g34400 | Os10g0485300 | - | Detail |
| CX10g009496 | 10:16,739,495-16,741,427 | + | C1H10g16158 | C2H10g15405 | LOC_Os10g34420 | Os10g0485500 | - | Detail |
| CX10g010816 | 10:16,742,205-16,759,572 | + | C1H10g14104 | C2H10g16647 | LOC_Os10g34430 | Os10g0485600 | DCL3B, OsDCL3b | Detail |
| CX10g010390 | 10:16,760,926-16,763,159 | - | C1H10g18204 | C2H10g24572 | LOC_Os10g34440 | Os10g0485800 | - | Detail |
| CX10g008103 | 10:16,767,519-16,768,505 | - | C1H10g31345 | C2H10g06492 | LOC_Os10g34450 | - | - | Detail |
| CX10g009990 | 10:16,774,530-16,777,421 | + | C1H10g29531 | C2H10g28068 | LOC_Os10g34470 | - | - | Detail |
| CX10g009984 | 10:16,778,025-16,781,741 | - | C1H10g12883 | C2H10g25874 | LOC_Os10g34480 | Os10g0486100 | - | Detail |
| CX10g009002 | 10:16,788,347-16,788,496 | - | - | - | - | Os01g0728000 | - | Detail |