| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g06549 | 4:20,500,435-20,505,313 | - | C1H4g03925 | - | LOC_Os04g39900 | Os04g0474900 | OsTAGG1, Os4BGlu13 | Detail |
| C2H4g07132 | 4:20,506,722-20,511,344 | - | - | - | - | Os04g0475000 | - | Detail |
| C2H4g15875 | 4:20,507,944-20,510,355 | + | C1H4g27571 | CX4g031592 | LOC_Os04g39910 | Os04g0475100 | SDRLK-61 | Detail |
| C2H4g18216 | 4:20,514,254-20,516,662 | + | C1H4g19181 | CX4g034833 | LOC_Os04g39930 | Os04g0475200 | SDRLK-62 | Detail |
| C2H4g26452 | 4:20,518,651-20,519,679 | + | C1H4g08744 | CX4g033183 | LOC_Os04g39940 | Os04g0475250 | - | Detail |
| C2H4g17863 | 4:20,522,245-20,522,775 | - | C1H4g16959 | CX4g035822 | LOC_Os04g39950 | Os04g0475300 | - | Detail |
| C2H4g17299 | 4:20,523,668-20,524,519 | + | - | CX4g035952 | LOC_Os04g39960 | Os04g0475400 | - | Detail |
| C2H4g05329 | 4:20,525,382-20,526,617 | - | C1H4g29172 | CX4g033449 | LOC_Os04g39970 | Os04g0475500 | OsV4 | Detail |
| C2H4g06421 | 4:20,527,536-20,529,104 | - | C1H4g28080 | CX4g034856 | LOC_Os04g39980 | Os04g0475600 | DAO | Detail |
| C2H4g14060 | 4:20,532,754-20,536,682 | - | C1H4g25714 | CX4g035158 | LOC_Os04g40010 | Os04g0675600 | - | Detail |
| C2H4g03255 | 4:20,543,310-20,545,681 | + | C1H4g09528 | CX4g033390 | LOC_Os04g40030 | Os04g0476000 | - | Detail |
| C2H4g11644 | 4:20,546,470-20,552,948 | - | C1H4g27545 | CX4g033811 | LOC_Os04g40040 | Os04g0476100 | - | Detail |
| C2H4g01499 | 4:20,561,499-20,565,352 | + | C1H4g01159 | CX4g033662 | LOC_Os04g40050 | Os04g0476400 | - | Detail |
| C2H4g21737 | 4:20,566,135-20,571,092 | + | C1H4g20165 | CX4g033662 | LOC_Os04g40060 | Os04g0476500 | - | Detail |
| C2H4g08434 | 4:20,572,584-20,573,027 | + | C1H4g28689 | CX4g034928 | - | - | - | Detail |
| C2H4g06682 | 4:20,576,146-20,579,094 | + | C1H4g28689 | CX4g034928 | LOC_Os04g40070 | Os04g0476600 | - | Detail |
| C2H4g27838 | 4:20,580,451-20,583,689 | + | C1H4g22382 | CX4g036402 | LOC_Os04g40080 | Os04g0476700 | OsIRL3 | Detail |
| C2H4g01330 | 4:20,584,011-20,588,508 | - | C1H4g14627 | CX4g031992 | LOC_Os04g40090 | Os04g0476800 | OsNBR1 | Detail |
| C2H4g29662 | 4:20,593,366-20,595,825 | + | C1H4g19548 | CX4g034194 | LOC_Os04g40100 | Os04g0477000 | - | Detail |
| C2H4g02766 | 4:20,598,950-20,599,438 | - | C1H4g16625 | CX4g033655 | LOC_Os04g40120 | Os04g0477100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006086 | 1:4,600,155-4,600,367 | + | - | - | LOC_Os01g10030 | Os01g0196800 | - | Detail |
| CX1g004524 | 1:4,606,290-4,613,540 | + | C1H1g14618 | C2H1g28373 | LOC_Os01g10040 | Os01g0197100 | D2, D2b, CYP90D2/D2, d2, dwf2, CYP90D2, D2/CYP90D2, OsD2 | Detail |
| CX1g005780 | 1:4,615,296-4,620,496 | - | C1H1g20387 | C2H1g18174 | LOC_Os01g10050 | Os01g0197200 | - | Detail |
| CX1g005103 | 1:4,623,273-4,623,710 | + | - | C2H1g08298 | LOC_Os01g10070 | Os01g0197350 | - | Detail |
| CX1g005121 | 1:4,624,971-4,627,371 | + | C1H1g24747 | C2H1g17197 | LOC_Os01g10080 | Os01g0197400 | - | Detail |
| CX1g004435 | 1:4,627,825-4,629,738 | - | C1H1g01247 | C2H1g01272 | LOC_Os01g10090 | Os01g0197450 | - | Detail |
| CX1g002532 | 1:4,630,570-4,632,744 | - | C1H1g23699 | C2H1g12602 | LOC_Os01g10100 | Os01g0197500 | - | Detail |
| CX1g000181 | 1:4,638,471-4,642,911 | - | C1H1g02388 | C2H1g29964 | LOC_Os01g10110 | Os01g0197700 | Gn1a, OsCKX2 | Detail |
| CX1g006545 | 1:4,645,423-4,645,584 | - | - | - | - | - | - | Detail |
| CX1g005700 | 1:4,650,287-4,650,436 | - | - | - | - | - | - | Detail |
| CX1g006534 | 1:4,652,633-4,683,216 | - | C1H1g16458 | C2H1g14250 | LOC_Os01g10140 | Os01g0198000 | OsRDR4 | Detail |
| CX1g002313 | 1:4,687,542-4,687,691 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g001693 | 1:4,689,234-4,695,451 | - | C1H1g16973 | C2H1g26620 | LOC_Os01g10150 | Os01g0198200 | - | Detail |
| CX1g002926 | 1:4,706,098-4,707,832 | - | C1H1g29548 | C2H1g23718 | LOC_Os01g10180 | Os01g0198500 | - | Detail |
| CX1g000304 | 1:4,727,574-4,728,224 | + | - | C2H1g20955 | LOC_Os01g10210 | Os01g0198900 | - | Detail |
| CX1g000572 | 1:4,737,387-4,737,986 | + | - | C2H1g09712 | LOC_Os01g10230 | Os01g0199300 | - | Detail |
| CX1g006691 | 1:4,741,559-4,745,829 | - | C1H1g25179 | C2H1g26709 | LOC_Os01g10250 | Os01g0199400 | - | Detail |
| CX1g002814 | 1:4,749,275-4,750,059 | + | C1H1g11604 | - | - | - | - | Detail |
| CX1g002407 | 1:4,752,370-4,752,954 | - | C1H1g07163 | C2H1g26843 | LOC_Os01g10260 | Os01g0199700 | - | Detail |
| CX1g001007 | 1:4,757,168-4,763,387 | + | C1H1g01459 | C2H1g21983 | LOC_Os01g10280 | Os01g0199900 | - | Detail |