| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g11208 | 11:1,346,027-1,350,474 | - | C1H11g18520 | - | LOC_Os11g04020 | Os11g0134900 | OsTOM1 | Detail |
| C2H11g07873 | 11:1,354,515-1,358,169 | - | C1H11g21324 | - | LOC_Os11g04030 | Os11g0135000 | - | Detail |
| C2H11g03534 | 11:1,364,892-1,369,867 | - | C1H11g00619 | - | LOC_Os11g04060 | Os11g0135300 | - | Detail |
| C2H11g00218 | 11:1,370,510-1,372,754 | - | C1H11g00619 | CX11g013375 | LOC_Os11g04070 | Os11g0135400 | OsP0B | Detail |
| C2H11g22180 | 11:1,373,563-1,380,634 | - | C1H11g25913 | - | LOC_Os11g04104 | Os11g0135900 | - | Detail |
| C2H11g30432 | 11:1,383,661-1,384,020 | - | C1H11g03794 | - | LOC_Os11g04104 | Os11g0135900 | - | Detail |
| C2H11g04250 | 11:1,393,083-1,393,548 | + | C1H11g15977 | - | - | - | - | Detail |
| C2H11g16753 | 11:1,397,105-1,398,756 | + | C1H11g15977 | CX11g014563 | LOC_Os11g04140 | Os11g0136300 | - | Detail |
| C2H11g08133 | 11:1,399,684-1,408,935 | - | C1H11g22222 | - | LOC_Os11g04150 | Os11g0136400 | - | Detail |
| C2H11g23966 | 11:1,408,908-1,410,830 | + | C1H11g18911 | CX11g011336 | LOC_Os11g04160 | Os11g0136500 | - | Detail |
| C2H11g06531 | 11:1,411,395-1,413,461 | + | C1H11g09099 | CX11g014221 | LOC_Os11g04170 | Os11g0136600 | OsCPK25 | Detail |
| C2H11g07404 | 11:1,416,197-1,418,352 | - | C1H11g14221 | CX11g010991 | LOC_Os11g04180 | Os11g0136800 | - | Detail |
| C2H11g03199 | 11:1,421,573-1,424,774 | - | C1H11g00603 | CX11g013508 | LOC_Os11g04190 | Os11g0137000 | OsPIN1c | Detail |
| C2H11g10377 | 11:1,426,662-1,432,225 | - | C1H11g22523 | CX11g011201 | LOC_Os11g04200 | Os11g0137100 | - | Detail |
| C2H11g26805 | 11:1,434,365-1,437,926 | + | C1H11g21878 | CX11g010892 | LOC_Os11g04210 | Os11g0137200 | - | Detail |
| C2H11g28690 | 11:1,439,898-1,456,010 | - | C1H11g16378 | CX11g011779 | LOC_Os11g04220 | Os11g0137300 | - | Detail |
| C2H11g30363 | 11:1,456,409-1,462,575 | + | C1H11g27410 | CX11g014296 | LOC_Os11g04230 | Os11g0137400 | - | Detail |
| C2H11g11083 | 11:1,465,001-1,467,362 | + | C1H11g18293 | CX11g014296 | LOC_Os11g04240 | Os11g0137500 | - | Detail |
| C2H11g03884 | 11:1,474,217-1,475,836 | + | C1H11g27280 | - | LOC_Os11g04260 | - | - | Detail |
| C2H11g18344 | 11:1,481,302-1,488,785 | + | C1H11g07770 | CX11g012159 | LOC_Os11g04267 | Os12g0140300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006086 | 1:4,600,155-4,600,367 | + | - | - | LOC_Os01g10030 | Os01g0196800 | - | Detail |
| CX1g004524 | 1:4,606,290-4,613,540 | + | C1H1g14618 | C2H1g28373 | LOC_Os01g10040 | Os01g0197100 | D2, D2b, CYP90D2/D2, d2, dwf2, CYP90D2, D2/CYP90D2, OsD2 | Detail |
| CX1g005780 | 1:4,615,296-4,620,496 | - | C1H1g20387 | C2H1g18174 | LOC_Os01g10050 | Os01g0197200 | - | Detail |
| CX1g005103 | 1:4,623,273-4,623,710 | + | - | C2H1g08298 | LOC_Os01g10070 | Os01g0197350 | - | Detail |
| CX1g005121 | 1:4,624,971-4,627,371 | + | C1H1g24747 | C2H1g17197 | LOC_Os01g10080 | Os01g0197400 | - | Detail |
| CX1g004435 | 1:4,627,825-4,629,738 | - | C1H1g01247 | C2H1g01272 | LOC_Os01g10090 | Os01g0197450 | - | Detail |
| CX1g002532 | 1:4,630,570-4,632,744 | - | C1H1g23699 | C2H1g12602 | LOC_Os01g10100 | Os01g0197500 | - | Detail |
| CX1g000181 | 1:4,638,471-4,642,911 | - | C1H1g02388 | C2H1g29964 | LOC_Os01g10110 | Os01g0197700 | Gn1a, OsCKX2 | Detail |
| CX1g006545 | 1:4,645,423-4,645,584 | - | - | - | - | - | - | Detail |
| CX1g005700 | 1:4,650,287-4,650,436 | - | - | - | - | - | - | Detail |
| CX1g006534 | 1:4,652,633-4,683,216 | - | C1H1g16458 | C2H1g14250 | LOC_Os01g10140 | Os01g0198000 | OsRDR4 | Detail |
| CX1g002313 | 1:4,687,542-4,687,691 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g001693 | 1:4,689,234-4,695,451 | - | C1H1g16973 | C2H1g26620 | LOC_Os01g10150 | Os01g0198200 | - | Detail |
| CX1g002926 | 1:4,706,098-4,707,832 | - | C1H1g29548 | C2H1g23718 | LOC_Os01g10180 | Os01g0198500 | - | Detail |
| CX1g000304 | 1:4,727,574-4,728,224 | + | - | C2H1g20955 | LOC_Os01g10210 | Os01g0198900 | - | Detail |
| CX1g000572 | 1:4,737,387-4,737,986 | + | - | C2H1g09712 | LOC_Os01g10230 | Os01g0199300 | - | Detail |
| CX1g006691 | 1:4,741,559-4,745,829 | - | C1H1g25179 | C2H1g26709 | LOC_Os01g10250 | Os01g0199400 | - | Detail |
| CX1g002814 | 1:4,749,275-4,750,059 | + | C1H1g11604 | - | - | - | - | Detail |
| CX1g002407 | 1:4,752,370-4,752,954 | - | C1H1g07163 | C2H1g26843 | LOC_Os01g10260 | Os01g0199700 | - | Detail |
| CX1g001007 | 1:4,757,168-4,763,387 | + | C1H1g01459 | C2H1g21983 | LOC_Os01g10280 | Os01g0199900 | - | Detail |