| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g21830 | 11:838,953-841,629 | - | C2H11g22986 | CX11g011406 | LOC_Os11g02740 | Os11g0120200 | - | Detail |
| C1H11g02117 | 11:847,068-847,715 | - | C2H11g07452 | CX11g013084 | LOC_Os11g02750 | Os11g0120300 | - | Detail |
| C1H11g06531 | 11:856,294-858,539 | + | C2H11g01727 | CX11g013247 | LOC_Os11g02760 | Os11g0120600 | - | Detail |
| C1H11g00074 | 11:863,464-867,543 | + | C2H11g19747 | CX11g013247 | LOC_Os11g02774 | Os11g0120725 | - | Detail |
| C1H11g19265 | 11:867,074-868,939 | - | C2H11g07452 | CX11g013016 | LOC_Os11g02800 | Os11g0121000 | - | Detail |
| C1H11g20989 | 11:876,640-877,132 | - | C2H12g16514 | CX11g013512 | LOC_Os11g02820 | Os11g0121300 | - | Detail |
| C1H11g24980 | 11:879,383-883,925 | - | C2H11g27746 | CX11g012023 | LOC_Os11g02830 | Os11g0121400 | - | Detail |
| C1H11g18986 | 11:890,015-895,456 | - | C2H12g05365 | CX11g013805 | LOC_Os11g03050 | Os11g0123400 | - | Detail |
| C1H11g27081 | 11:896,828-899,519 | - | C2H11g18565 | CX11g012580 | LOC_Os11g03060 | Os11g0123500 | OsSNF7.3 | Detail |
| C1H11g13638 | 11:902,644-905,256 | + | C2H11g14593 | CX11g013051 | LOC_Os11g03070 | Os11g0123600 | - | Detail |
| C1H11g05824 | 11:925,994-928,866 | + | C2H11g13616 | CX11g012864 | LOC_Os11g03110 | Os11g0124300 | OsSCR1 | Detail |
| C1H11g21592 | 11:930,413-930,863 | + | C2H11g12710 | - | - | - | - | Detail |
| C1H11g02113 | 11:935,233-936,979 | + | C2H11g27808 | CX11g011459 | LOC_Os11g03130 | Os11g0124500 | - | Detail |
| C1H11g05866 | 11:951,313-956,885 | - | C2H11g30531 | CX11g010987 | LOC_Os11g03160 | Os11g0124900 | - | Detail |
| C1H11g27495 | 11:963,864-966,414 | - | C2H11g22399 | CX11g011530 | LOC_Os11g03200 | Os11g0125500 | - | Detail |
| C1H11g17257 | 11:967,139-967,899 | + | C2H11g17171 | CX11g014122 | LOC_Os12g02960 | Os11g0125601 | - | Detail |
| C1H11g02962 | 11:968,375-970,888 | - | C2H11g18559 | CX11g012533 | LOC_Os11g03220 | Os11g0125700 | - | Detail |
| C1H11g20891 | 11:976,812-979,352 | + | C2H11g08980 | CX11g013454 | LOC_Os12g02980 | Os11g0125900 | - | Detail |
| C1H11g28147 | 11:981,032-984,242 | + | C2H11g29415 | CX11g013454 | LOC_Os11g03270 | Os11g0126400 | OsAPY6 | Detail |
| C1H11g29922 | 11:984,421-987,083 | + | C2H11g29415 | CX11g013454 | LOC_Os11g03270 | Os11g0126400 | OsAPY6 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006086 | 1:4,600,155-4,600,367 | + | - | - | LOC_Os01g10030 | Os01g0196800 | - | Detail |
| CX1g004524 | 1:4,606,290-4,613,540 | + | C1H1g14618 | C2H1g28373 | LOC_Os01g10040 | Os01g0197100 | D2, D2b, CYP90D2/D2, d2, dwf2, CYP90D2, D2/CYP90D2, OsD2 | Detail |
| CX1g005780 | 1:4,615,296-4,620,496 | - | C1H1g20387 | C2H1g18174 | LOC_Os01g10050 | Os01g0197200 | - | Detail |
| CX1g005103 | 1:4,623,273-4,623,710 | + | - | C2H1g08298 | LOC_Os01g10070 | Os01g0197350 | - | Detail |
| CX1g005121 | 1:4,624,971-4,627,371 | + | C1H1g24747 | C2H1g17197 | LOC_Os01g10080 | Os01g0197400 | - | Detail |
| CX1g004435 | 1:4,627,825-4,629,738 | - | C1H1g01247 | C2H1g01272 | LOC_Os01g10090 | Os01g0197450 | - | Detail |
| CX1g002532 | 1:4,630,570-4,632,744 | - | C1H1g23699 | C2H1g12602 | LOC_Os01g10100 | Os01g0197500 | - | Detail |
| CX1g000181 | 1:4,638,471-4,642,911 | - | C1H1g02388 | C2H1g29964 | LOC_Os01g10110 | Os01g0197700 | Gn1a, OsCKX2 | Detail |
| CX1g006545 | 1:4,645,423-4,645,584 | - | - | - | - | - | - | Detail |
| CX1g005700 | 1:4,650,287-4,650,436 | - | - | - | - | - | - | Detail |
| CX1g006534 | 1:4,652,633-4,683,216 | - | C1H1g16458 | C2H1g14250 | LOC_Os01g10140 | Os01g0198000 | OsRDR4 | Detail |
| CX1g002313 | 1:4,687,542-4,687,691 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g001693 | 1:4,689,234-4,695,451 | - | C1H1g16973 | C2H1g26620 | LOC_Os01g10150 | Os01g0198200 | - | Detail |
| CX1g002926 | 1:4,706,098-4,707,832 | - | C1H1g29548 | C2H1g23718 | LOC_Os01g10180 | Os01g0198500 | - | Detail |
| CX1g000304 | 1:4,727,574-4,728,224 | + | - | C2H1g20955 | LOC_Os01g10210 | Os01g0198900 | - | Detail |
| CX1g000572 | 1:4,737,387-4,737,986 | + | - | C2H1g09712 | LOC_Os01g10230 | Os01g0199300 | - | Detail |
| CX1g006691 | 1:4,741,559-4,745,829 | - | C1H1g25179 | C2H1g26709 | LOC_Os01g10250 | Os01g0199400 | - | Detail |
| CX1g002814 | 1:4,749,275-4,750,059 | + | C1H1g11604 | - | - | - | - | Detail |
| CX1g002407 | 1:4,752,370-4,752,954 | - | C1H1g07163 | C2H1g26843 | LOC_Os01g10260 | Os01g0199700 | - | Detail |
| CX1g001007 | 1:4,757,168-4,763,387 | + | C1H1g01459 | C2H1g21983 | LOC_Os01g10280 | Os01g0199900 | - | Detail |