| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H10g00323 | 10:12,018,602-12,020,571 | + | C2H10g18622 | CX10g010321 | LOC_Os10g25310 | Os10g0392600 | OsSPX3 | Detail |
| C1H10g09980 | 10:12,020,714-12,026,311 | - | C2H10g27800 | CX10g009727 | LOC_Os10g25320 | Os10g0392700 | - | Detail |
| C1H10g21450 | 10:12,038,829-12,042,409 | + | C2H10g02830 | CX10g007533 | LOC_Os10g25340 | Os10g0392900 | - | Detail |
| C1H10g15493 | 10:12,046,401-12,048,335 | - | C2H10g19231 | CX10g009365 | LOC_Os10g25360 | Os10g0393100 | - | Detail |
| C1H10g13743 | 10:12,056,215-12,059,204 | + | C2H10g25588 | CX10g008061 | LOC_Os10g25380 | Os10g0393600 | - | Detail |
| C1H10g31607 | 10:12,059,295-12,059,507 | + | - | - | - | - | - | Detail |
| C1H10g13643 | 10:12,059,812-12,061,028 | + | C2H10g05852 | CX10g009672 | LOC_Os10g25380 | Os10g0393700 | - | Detail |
| C1H10g30936 | 10:12,066,180-12,067,331 | + | C2H10g28794 | CX10g009672 | LOC_Os10g25380 | Os10g0393700 | - | Detail |
| C1H10g16931 | 10:12,071,253-12,073,144 | + | C2H10g01076 | CX10g008067 | LOC_Os10g25400 | Os10g0393800 | - | Detail |
| C1H10g23862 | 10:12,082,162-12,084,138 | + | C2H10g10432 | CX10g007533 | LOC_Os10g25420 | Os10g0394000 | - | Detail |
| C1H10g13437 | 10:12,084,851-12,089,817 | - | C2H10g08559 | CX10g010544 | LOC_Os10g25430 | Os10g0394100 | - | Detail |
| C1H10g26943 | 10:12,097,359-12,100,992 | + | C2H10g23512 | CX10g007438 | LOC_Os10g25450 | Os10g0394200 | - | Detail |
| C1H10g09772 | 10:12,109,601-12,114,966 | + | C2H10g03234 | CX10g007761 | LOC_Os10g25487 | Os10g0394400 | - | Detail |
| C1H10g06364 | 10:12,136,411-12,137,253 | + | C2H10g03086 | CX10g010785 | - | - | - | Detail |
| C1H10g24647 | 10:12,149,313-12,155,530 | - | C2H10g28121 | CX10g007449 | LOC_Os10g25550 | Os10g0395000 | - | Detail |
| C1H10g14227 | 10:12,160,915-12,165,119 | - | C2H10g05633 | CX10g008089 | LOC_Os10g25560 | Os10g0395100 | - | Detail |
| C1H10g09972 | 10:12,171,546-12,181,798 | - | C2H10g24322 | CX10g008089 | LOC_Os10g25565 | Os10g0395150 | - | Detail |
| C1H10g01562 | 10:12,186,127-12,186,501 | - | C2H10g15990 | CX10g010836 | - | Os10g0395200 | - | Detail |
| C1H10g30261 | 10:12,186,610-12,187,034 | - | - | - | - | - | - | Detail |
| C1H10g12313 | 10:12,190,756-12,191,983 | - | C2H10g21392 | CX10g008942 | LOC_Os10g25590 | Os10g0395400 | OsGSTU34 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006086 | 1:4,600,155-4,600,367 | + | - | - | LOC_Os01g10030 | Os01g0196800 | - | Detail |
| CX1g004524 | 1:4,606,290-4,613,540 | + | C1H1g14618 | C2H1g28373 | LOC_Os01g10040 | Os01g0197100 | D2, D2b, CYP90D2/D2, d2, dwf2, CYP90D2, D2/CYP90D2, OsD2 | Detail |
| CX1g005780 | 1:4,615,296-4,620,496 | - | C1H1g20387 | C2H1g18174 | LOC_Os01g10050 | Os01g0197200 | - | Detail |
| CX1g005103 | 1:4,623,273-4,623,710 | + | - | C2H1g08298 | LOC_Os01g10070 | Os01g0197350 | - | Detail |
| CX1g005121 | 1:4,624,971-4,627,371 | + | C1H1g24747 | C2H1g17197 | LOC_Os01g10080 | Os01g0197400 | - | Detail |
| CX1g004435 | 1:4,627,825-4,629,738 | - | C1H1g01247 | C2H1g01272 | LOC_Os01g10090 | Os01g0197450 | - | Detail |
| CX1g002532 | 1:4,630,570-4,632,744 | - | C1H1g23699 | C2H1g12602 | LOC_Os01g10100 | Os01g0197500 | - | Detail |
| CX1g000181 | 1:4,638,471-4,642,911 | - | C1H1g02388 | C2H1g29964 | LOC_Os01g10110 | Os01g0197700 | Gn1a, OsCKX2 | Detail |
| CX1g006545 | 1:4,645,423-4,645,584 | - | - | - | - | - | - | Detail |
| CX1g005700 | 1:4,650,287-4,650,436 | - | - | - | - | - | - | Detail |
| CX1g006534 | 1:4,652,633-4,683,216 | - | C1H1g16458 | C2H1g14250 | LOC_Os01g10140 | Os01g0198000 | OsRDR4 | Detail |
| CX1g002313 | 1:4,687,542-4,687,691 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g001693 | 1:4,689,234-4,695,451 | - | C1H1g16973 | C2H1g26620 | LOC_Os01g10150 | Os01g0198200 | - | Detail |
| CX1g002926 | 1:4,706,098-4,707,832 | - | C1H1g29548 | C2H1g23718 | LOC_Os01g10180 | Os01g0198500 | - | Detail |
| CX1g000304 | 1:4,727,574-4,728,224 | + | - | C2H1g20955 | LOC_Os01g10210 | Os01g0198900 | - | Detail |
| CX1g000572 | 1:4,737,387-4,737,986 | + | - | C2H1g09712 | LOC_Os01g10230 | Os01g0199300 | - | Detail |
| CX1g006691 | 1:4,741,559-4,745,829 | - | C1H1g25179 | C2H1g26709 | LOC_Os01g10250 | Os01g0199400 | - | Detail |
| CX1g002814 | 1:4,749,275-4,750,059 | + | C1H1g11604 | - | - | - | - | Detail |
| CX1g002407 | 1:4,752,370-4,752,954 | - | C1H1g07163 | C2H1g26843 | LOC_Os01g10260 | Os01g0199700 | - | Detail |
| CX1g001007 | 1:4,757,168-4,763,387 | + | C1H1g01459 | C2H1g21983 | LOC_Os01g10280 | Os01g0199900 | - | Detail |