| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g12443 | 3:5,464,485-5,475,655 | - | C1H3g16227 | CX3g029221 | LOC_Os03g11734 | Os03g0216700 | OsFRDL1 | Detail |
| C2H3g18755 | 3:5,482,141-5,484,964 | + | C1H3g24567 | CX3g029021 | LOC_Os03g11760 | Os03g0216800 | - | Detail |
| C2H3g21216 | 3:5,489,324-5,493,700 | + | C1H3g18611 | CX3g025795 | LOC_Os03g11770 | Os03g0216900 | - | Detail |
| C2H3g13077 | 3:5,494,224-5,494,622 | - | C1H3g15471 | CX3g025145 | LOC_Os03g11780 | Os03g0217000 | - | Detail |
| C2H3g17874 | 3:5,498,744-5,504,625 | + | C1H3g25970 | CX3g026533 | LOC_Os03g11890 | Os03g0218300 | - | Detail |
| C2H3g10730 | 3:5,505,014-5,509,299 | - | C1H3g04450 | CX3g031320 | LOC_Os03g11900 | Os03g0218400 | OsMST4 | Detail |
| C2H3g22152 | 3:5,514,907-5,518,091 | - | C1H3g10632 | CX3g030309 | LOC_Os03g11910 | Os03g0218500 | - | Detail |
| C2H3g13924 | 3:5,534,286-5,537,026 | + | C1H3g06308 | CX3g025032 | LOC_Os03g11950 | Os03g0219100 | OsSec14-26 | Detail |
| C2H3g24481 | 3:5,540,547-5,543,282 | - | C1H3g24825 | CX3g027163 | LOC_Os03g11960 | Os03g0219200 | OsCSD3 | Detail |
| C2H3g03285 | 3:5,543,764-5,547,541 | - | C1H3g11590 | CX3g028374 | LOC_Os03g11970 | Os03g0219300 | - | Detail |
| C2H3g25818 | 3:5,548,401-5,551,001 | - | C1H3g20877 | CX3g028318 | LOC_Os03g11980 | Os03g0219400 | - | Detail |
| C2H3g26156 | 3:5,552,006-5,552,314 | + | C1H3g14036 | CX3g029685 | LOC_Os03g11990 | Os03g0219500 | - | Detail |
| C2H3g18310 | 3:5,554,652-5,557,006 | - | C1H3g26472 | CX3g028368 | LOC_Os03g12000 | Os03g0219700 | - | Detail |
| C2H3g00756 | 3:5,559,765-5,561,920 | + | C1H3g15777 | CX3g026437 | LOC_Os03g12010 | - | - | Detail |
| C2H3g05450 | 3:5,564,233-5,566,402 | + | C1H3g13535 | CX3g028610 | LOC_Os03g12020 | Os03g0219900 | - | Detail |
| C2H3g23972 | 3:5,571,435-5,573,474 | - | C1H3g10915 | CX3g026270 | LOC_Os03g12030 | Os03g0220100 | WSL4, CER6/CUT1, CER6, CUT1, OsCER6 | Detail |
| C2H3g23561 | 3:5,594,270-5,597,015 | + | C1H3g01618 | CX3g025137 | LOC_Os03g12110 | Os03g0221200 | - | Detail |
| C2H3g25327 | 3:5,597,584-5,605,170 | - | C1H3g06610 | CX3g025281 | LOC_Os03g12120 | Os03g0221300 | - | Detail |
| C2H3g25299 | 3:5,608,099-5,612,075 | + | C1H3g09947 | CX3g028100 | LOC_Os03g12140 | Os03g0221500 | - | Detail |
| C2H3g19033 | 3:5,615,133-5,617,670 | + | C1H3g29297 | CX3g026372 | LOC_Os03g12150 | Os03g0221700 | SDRLK-9 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g009799 | 10:14,207,578-14,212,285 | - | C1H10g21525 | C2H10g17780 | LOC_Os10g30420 | Os10g0440100 | - | Detail |
| CX10g010289 | 10:14,221,385-14,222,779 | + | C1H10g05771 | C2H10g28542 | LOC_Os10g30450 | Os10g0440500 | - | Detail |
| CX10g009886 | 10:14,224,097-14,224,681 | + | - | C2H10g08888 | LOC_Os10g31070 | - | - | Detail |
| CX10g008087 | 10:14,227,123-14,227,302 | + | - | - | - | Os02g0188201 | - | Detail |
| CX10g009437 | 10:14,243,108-14,243,293 | - | - | - | - | Os07g0616100 | - | Detail |
| CX10g010131 | 10:14,255,713-14,257,770 | + | C1H10g00565 | C2H10g02999 | LOC_Os10g30530 | Os10g0441900 | - | Detail |
| CX10g008259 | 10:14,258,856-14,260,973 | + | C1H10g00565 | C2H10g06855 | LOC_Os10g30540 | Os10g0442000 | - | Detail |
| CX10g009347 | 10:14,263,856-14,272,228 | - | C1H10g26446 | C2H10g15717 | LOC_Os10g30550 | Os10g0442100 | - | Detail |
| CX10g009553 | 10:14,273,225-14,275,222 | - | C1H10g14211 | C2H10g07038 | LOC_Os10g30560 | Os10g0442400 | - | Detail |
| CX10g007502 | 10:14,273,228-14,274,187 | + | - | - | - | Os10g0442466 | - | Detail |
| CX10g008947 | 10:14,281,553-14,282,167 | - | C1H10g14211 | C2H10g07038 | LOC_Os10g30560 | Os10g0442400 | - | Detail |
| CX10g009408 | 10:14,291,145-14,295,276 | + | C1H10g09265 | C2H10g28140 | LOC_Os10g30580 | Os10g0442600 | OsCDC48E | Detail |
| CX10g007659 | 10:14,299,906-14,302,047 | - | C1H10g15574 | C2H10g26247 | LOC_Os10g30600 | Os10g0442800 | OsRLCK301 | Detail |
| CX10g010678 | 10:14,307,523-14,315,045 | + | C1H10g29399 | C2H10g19482 | LOC_Os10g30610 | Os10g0442900 | ABCG25, OsABCG25, OsWBC26 | Detail |
| CX10g008392 | 10:14,316,197-14,316,565 | - | - | - | - | - | - | Detail |
| CX10g009034 | 10:14,317,971-14,320,487 | - | C1H10g20029 | C2H3g00214 | LOC_Os10g30620 | Os10g0443000 | - | Detail |
| CX10g008900 | 10:14,327,756-14,331,350 | + | C1H10g02686 | C2H10g29135 | LOC_Os10g30640 | Os10g0443200 | - | Detail |
| CX10g009834 | 10:14,369,436-14,370,032 | + | - | C2H10g11516 | - | - | - | Detail |
| CX10g007832 | 10:14,371,298-14,375,418 | + | C1H10g08616 | C2H10g04583 | LOC_Os10g30750 | Os10g0444400 | - | Detail |
| CX10g008756 | 10:14,377,004-14,378,545 | - | C1H10g06138 | C2H10g18728 | LOC_Os10g30760 | Os10g0444500 | PPR406 | Detail |