| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g19845 | 1:11,325,421-11,326,486 | - | C2H1g03166 | - | LOC_Os09g23399 | Os09g0398300 | - | Detail |
| C1H1g10843 | 1:11,363,466-11,365,664 | + | C2H1g26385 | CX1g004352 | LOC_Os01g23070 | Os01g0333600 | - | Detail |
| C1H1g07869 | 1:11,383,937-11,386,279 | + | C2H1g15414 | CX1g006442 | LOC_Os01g23070 | Os01g0335600 | - | Detail |
| C1H1g08644 | 1:11,388,994-11,392,031 | + | C2H1g23874 | CX1g000930 | LOC_Os01g23380 | Os01g0335700 | - | Detail |
| C1H1g03965 | 1:11,406,203-11,406,512 | + | C2H1g14248 | - | LOC_Os01g23530 | Os01g0337100 | OsTPS1 | Detail |
| C1H1g04116 | 1:11,407,816-11,416,507 | - | C2H2g06636 | CX1g003720 | - | - | - | Detail |
| C1H1g24526 | 1:11,410,200-11,415,689 | + | C2H1g14248 | CX1g004853 | LOC_Os01g23530 | Os01g0337100 | OsTPS1 | Detail |
| C1H1g20227 | 1:11,419,587-11,420,557 | + | C2H1g00772 | - | LOC_Os01g23580 | Os01g0337500 | - | Detail |
| C1H1g15203 | 1:11,424,651-11,428,143 | + | C2H1g23715 | CX1g006068 | LOC_Os01g23580 | Os01g0337500 | - | Detail |
| C1H1g02550 | 1:11,428,670-11,443,946 | - | C2H1g14719 | CX1g006612 | LOC_Os01g23590 | Os01g0337600 | - | Detail |
| C1H1g31824 | 1:11,446,918-11,454,792 | + | C2H1g25789 | CX1g005196 | LOC_Os01g23610 | Os01g0337900 | OsLPD2 | Detail |
| C1H1g07766 | 1:11,460,676-11,462,847 | + | C2H1g07427 | CX1g003937 | LOC_Os01g23620 | Os01g0338000 | - | Detail |
| C1H1g18847 | 1:11,465,748-11,468,555 | + | C2H1g12886 | CX1g003576 | LOC_Os01g23630 | Os01g0338100 | - | Detail |
| C1H1g20446 | 1:11,470,953-11,479,877 | + | C2H1g27271 | CX1g002951 | LOC_Os01g23640 | Os01g0338200 | - | Detail |
| C1H1g02265 | 1:11,488,844-11,493,096 | - | C2H1g02413 | CX1g002645 | LOC_Os01g23680 | Os01g0338600 | - | Detail |
| C1H1g28850 | 1:11,512,144-11,514,394 | - | C2H1g16601 | CX1g005605 | LOC_Os01g23710 | Os01g0339500 | - | Detail |
| C1H1g17586 | 1:11,515,058-11,515,784 | + | C2H1g18968 | CX10g009759 | LOC_Os10g25600 | Os01g0339600 | - | Detail |
| C1H1g03283 | 1:11,516,100-11,517,329 | + | C2H1g18968 | - | LOC_Os10g25600 | Os01g0339600 | - | Detail |
| C1H1g03194 | 1:11,518,455-11,518,685 | - | C2H1g23562 | CX1g002019 | - | - | - | Detail |
| C1H1g26165 | 1:11,518,489-11,518,860 | + | C2H1g16595 | - | - | Os01g0339851 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g009799 | 10:14,207,578-14,212,285 | - | C1H10g21525 | C2H10g17780 | LOC_Os10g30420 | Os10g0440100 | - | Detail |
| CX10g010289 | 10:14,221,385-14,222,779 | + | C1H10g05771 | C2H10g28542 | LOC_Os10g30450 | Os10g0440500 | - | Detail |
| CX10g009886 | 10:14,224,097-14,224,681 | + | - | C2H10g08888 | LOC_Os10g31070 | - | - | Detail |
| CX10g008087 | 10:14,227,123-14,227,302 | + | - | - | - | Os02g0188201 | - | Detail |
| CX10g009437 | 10:14,243,108-14,243,293 | - | - | - | - | Os07g0616100 | - | Detail |
| CX10g010131 | 10:14,255,713-14,257,770 | + | C1H10g00565 | C2H10g02999 | LOC_Os10g30530 | Os10g0441900 | - | Detail |
| CX10g008259 | 10:14,258,856-14,260,973 | + | C1H10g00565 | C2H10g06855 | LOC_Os10g30540 | Os10g0442000 | - | Detail |
| CX10g009347 | 10:14,263,856-14,272,228 | - | C1H10g26446 | C2H10g15717 | LOC_Os10g30550 | Os10g0442100 | - | Detail |
| CX10g009553 | 10:14,273,225-14,275,222 | - | C1H10g14211 | C2H10g07038 | LOC_Os10g30560 | Os10g0442400 | - | Detail |
| CX10g007502 | 10:14,273,228-14,274,187 | + | - | - | - | Os10g0442466 | - | Detail |
| CX10g008947 | 10:14,281,553-14,282,167 | - | C1H10g14211 | C2H10g07038 | LOC_Os10g30560 | Os10g0442400 | - | Detail |
| CX10g009408 | 10:14,291,145-14,295,276 | + | C1H10g09265 | C2H10g28140 | LOC_Os10g30580 | Os10g0442600 | OsCDC48E | Detail |
| CX10g007659 | 10:14,299,906-14,302,047 | - | C1H10g15574 | C2H10g26247 | LOC_Os10g30600 | Os10g0442800 | OsRLCK301 | Detail |
| CX10g010678 | 10:14,307,523-14,315,045 | + | C1H10g29399 | C2H10g19482 | LOC_Os10g30610 | Os10g0442900 | ABCG25, OsABCG25, OsWBC26 | Detail |
| CX10g008392 | 10:14,316,197-14,316,565 | - | - | - | - | - | - | Detail |
| CX10g009034 | 10:14,317,971-14,320,487 | - | C1H10g20029 | C2H3g00214 | LOC_Os10g30620 | Os10g0443000 | - | Detail |
| CX10g008900 | 10:14,327,756-14,331,350 | + | C1H10g02686 | C2H10g29135 | LOC_Os10g30640 | Os10g0443200 | - | Detail |
| CX10g009834 | 10:14,369,436-14,370,032 | + | - | C2H10g11516 | - | - | - | Detail |
| CX10g007832 | 10:14,371,298-14,375,418 | + | C1H10g08616 | C2H10g04583 | LOC_Os10g30750 | Os10g0444400 | - | Detail |
| CX10g008756 | 10:14,377,004-14,378,545 | - | C1H10g06138 | C2H10g18728 | LOC_Os10g30760 | Os10g0444500 | PPR406 | Detail |