| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g15691 | 2:18,518,729-18,530,008 | - | C2H2g20323 | CX2g022806 | LOC_Os02g32660 | Os02g0528200 | SBE3, SBEIII*, SBEIII, Sbe3, RBE3, QEIIa, QEIIA, BEIIb, BEIIB, SBEIIb, OsBEIIb, sbe3, SBE III | Detail |
| C1H2g29366 | 2:18,540,315-18,542,956 | - | C2H2g15285 | CX2g024606 | LOC_Os02g32690 | Os02g0318450 | - | Detail |
| C1H2g14806 | 2:18,546,359-18,556,471 | - | C2H2g15285 | CX2g020306 | LOC_Os02g32690 | Os02g0528900 | - | Detail |
| C1H2g11870 | 2:18,557,962-18,558,666 | - | C2H2g20296 | - | LOC_Os02g32700 | - | - | Detail |
| C1H2g12236 | 2:18,560,447-18,562,253 | - | - | - | - | - | - | Detail |
| C1H2g00920 | 2:18,571,975-18,576,501 | + | C2H2g10414 | CX2g022433 | LOC_Os02g32730 | Os02g0529400 | - | Detail |
| C1H2g24766 | 2:18,578,241-18,579,947 | + | C2H2g18145 | CX2g020157 | LOC_Os02g32740 | Os02g0529500 | - | Detail |
| C1H2g22581 | 2:18,590,623-18,592,115 | - | C2H2g17400 | CX2g023637 | LOC_Os02g32760 | Os02g0529700 | - | Detail |
| C1H2g07352 | 2:18,593,618-18,601,188 | - | C2H2g26264 | CX2g021706 | LOC_Os02g32770 | Os02g0529800 | - | Detail |
| C1H2g17686 | 2:18,610,094-18,611,375 | - | C2H2g27061 | CX2g021636 | LOC_Os02g32814 | Os02g0530100 | - | Detail |
| C1H2g06488 | 2:18,618,849-18,619,328 | + | C2H2g29992 | CX2g020180 | LOC_Os02g32840 | Os02g0530300 | OsSAP5 | Detail |
| C1H2g03635 | 2:18,636,340-18,636,609 | + | C2H2g28791 | CX2g021909 | LOC_Os02g32850 | Os02g0530500 | - | Detail |
| C1H2g17644 | 2:18,641,166-18,646,101 | - | C2H2g06644 | CX2g021102 | LOC_Os02g32860 | Os02g0530600 | - | Detail |
| C1H2g20262 | 2:18,652,232-18,659,840 | + | C2H2g13474 | CX2g023644 | LOC_Os02g32930 | Os02g0531200 | - | Detail |
| C1H2g17709 | 2:18,669,439-18,670,607 | - | C2H2g09518 | CX2g023678 | LOC_Os02g32950 | Os02g0531600 | RCN2 | Detail |
| C1H2g28902 | 2:18,685,577-18,690,879 | + | C2H2g15698 | CX2g019431 | LOC_Os02g32970 | Os04g0411800 | - | Detail |
| C1H2g22832 | 2:18,714,021-18,717,719 | + | C2H2g22707 | CX2g023689 | LOC_Os02g33000 | Os02g0532900 | - | Detail |
| C1H2g16813 | 2:18,717,827-18,723,569 | - | C2H2g18655 | CX2g019017 | LOC_Os02g33010 | Os02g0533000 | - | Detail |
| C1H2g00080 | 2:18,727,159-18,729,594 | + | C2H2g19682 | CX2g024724 | LOC_Os02g33020 | Os02g0533200 | - | Detail |
| C1H2g31211 | 2:18,730,871-18,733,216 | + | C2H2g19682 | CX2g023010 | LOC_Os02g33030 | Os02g0533300 | OsalphaCA1, OsαCA1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g009799 | 10:14,207,578-14,212,285 | - | C1H10g21525 | C2H10g17780 | LOC_Os10g30420 | Os10g0440100 | - | Detail |
| CX10g010289 | 10:14,221,385-14,222,779 | + | C1H10g05771 | C2H10g28542 | LOC_Os10g30450 | Os10g0440500 | - | Detail |
| CX10g009886 | 10:14,224,097-14,224,681 | + | - | C2H10g08888 | LOC_Os10g31070 | - | - | Detail |
| CX10g008087 | 10:14,227,123-14,227,302 | + | - | - | - | Os02g0188201 | - | Detail |
| CX10g009437 | 10:14,243,108-14,243,293 | - | - | - | - | Os07g0616100 | - | Detail |
| CX10g010131 | 10:14,255,713-14,257,770 | + | C1H10g00565 | C2H10g02999 | LOC_Os10g30530 | Os10g0441900 | - | Detail |
| CX10g008259 | 10:14,258,856-14,260,973 | + | C1H10g00565 | C2H10g06855 | LOC_Os10g30540 | Os10g0442000 | - | Detail |
| CX10g009347 | 10:14,263,856-14,272,228 | - | C1H10g26446 | C2H10g15717 | LOC_Os10g30550 | Os10g0442100 | - | Detail |
| CX10g009553 | 10:14,273,225-14,275,222 | - | C1H10g14211 | C2H10g07038 | LOC_Os10g30560 | Os10g0442400 | - | Detail |
| CX10g007502 | 10:14,273,228-14,274,187 | + | - | - | - | Os10g0442466 | - | Detail |
| CX10g008947 | 10:14,281,553-14,282,167 | - | C1H10g14211 | C2H10g07038 | LOC_Os10g30560 | Os10g0442400 | - | Detail |
| CX10g009408 | 10:14,291,145-14,295,276 | + | C1H10g09265 | C2H10g28140 | LOC_Os10g30580 | Os10g0442600 | OsCDC48E | Detail |
| CX10g007659 | 10:14,299,906-14,302,047 | - | C1H10g15574 | C2H10g26247 | LOC_Os10g30600 | Os10g0442800 | OsRLCK301 | Detail |
| CX10g010678 | 10:14,307,523-14,315,045 | + | C1H10g29399 | C2H10g19482 | LOC_Os10g30610 | Os10g0442900 | ABCG25, OsABCG25, OsWBC26 | Detail |
| CX10g008392 | 10:14,316,197-14,316,565 | - | - | - | - | - | - | Detail |
| CX10g009034 | 10:14,317,971-14,320,487 | - | C1H10g20029 | C2H3g00214 | LOC_Os10g30620 | Os10g0443000 | - | Detail |
| CX10g008900 | 10:14,327,756-14,331,350 | + | C1H10g02686 | C2H10g29135 | LOC_Os10g30640 | Os10g0443200 | - | Detail |
| CX10g009834 | 10:14,369,436-14,370,032 | + | - | C2H10g11516 | - | - | - | Detail |
| CX10g007832 | 10:14,371,298-14,375,418 | + | C1H10g08616 | C2H10g04583 | LOC_Os10g30750 | Os10g0444400 | - | Detail |
| CX10g008756 | 10:14,377,004-14,378,545 | - | C1H10g06138 | C2H10g18728 | LOC_Os10g30760 | Os10g0444500 | PPR406 | Detail |