| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g00982 | 9:15,341,464-15,348,599 | + | C1H9g04718 | CX9g058034 | LOC_Os09g30100 | Os09g0477900 | - | Detail |
| C2H9g23645 | 9:15,354,509-15,359,653 | - | C1H9g04101 | CX9g056162 | LOC_Os09g30120 | Os09g0478100 | - | Detail |
| C2H9g06312 | 9:15,360,751-15,367,118 | - | C1H9g22612 | CX9g057896 | LOC_Os09g30130 | Os09g0478300 | OsCSLE6 | Detail |
| C2H9g29803 | 9:15,375,755-15,377,307 | - | C1H9g19035 | CX9g057032 | LOC_Os09g30140 | Os09g0478400 | - | Detail |
| C2H9g04959 | 9:15,382,211-15,385,531 | + | C1H9g12687 | CX9g057709 | LOC_Os09g30150 | Os09g0478500 | OsAGC17 | Detail |
| C2H9g08126 | 9:15,405,082-15,411,583 | + | C1H9g29116 | CX9g056410 | LOC_Os09g30170 | Os09g0479100 | - | Detail |
| C2H9g01571 | 9:15,419,021-15,422,792 | + | C1H9g00099 | CX9g056788 | LOC_Os09g30190 | Os09g0479200 | - | Detail |
| C2H9g13410 | 9:15,424,868-15,426,906 | + | C1H9g15451 | CX9g056798 | LOC_Os09g30200 | Os09g0479300 | - | Detail |
| C2H9g19280 | 9:15,431,998-15,432,756 | + | C1H9g03732 | CX9g057374 | LOC_Os09g30210 | Os09g0479400 | - | Detail |
| C2H9g09775 | 9:15,435,316-15,436,011 | + | C1H9g03732 | CX9g057374 | LOC_Os09g30210 | Os09g0479400 | - | Detail |
| C2H9g22611 | 9:15,437,219-15,440,461 | - | C1H9g17028 | CX9g055862 | LOC_Os09g30220 | Os09g0479500 | - | Detail |
| C2H9g15107 | 9:15,447,820-15,450,960 | - | C1H9g23057 | CX9g057142 | LOC_Os09g30230 | Os09g0479600 | - | Detail |
| C2H9g15232 | 9:15,460,019-15,461,096 | + | C1H9g25753 | CX9g057685 | LOC_Os09g30250 | Os09g0479900 | OsSUB58 | Detail |
| C2H9g10204 | 9:15,461,891-15,464,262 | + | C1H9g25753 | CX9g057685 | LOC_Os09g30250 | Os09g0479900 | OsSUB58 | Detail |
| C2H9g12768 | 9:15,466,054-15,466,834 | + | C1H9g25753 | CX9g057685 | LOC_Os09g30250 | Os09g0479900 | OsSUB58 | Detail |
| C2H9g02314 | 9:15,466,933-15,468,809 | + | C1H9g25753 | CX9g057685 | LOC_Os09g30250 | Os09g0479900 | OsSUB58 | Detail |
| C2H9g23194 | 9:15,477,068-15,481,136 | + | C1H9g19838 | CX9g056594 | LOC_Os09g30280 | Os09g0480400 | - | Detail |
| C2H9g17316 | 9:15,481,731-15,482,144 | + | C1H9g16448 | CX9g057550 | LOC_Os09g30290 | Os09g0480532 | - | Detail |
| C2H9g20948 | 9:15,484,071-15,484,358 | + | C1H9g02141 | CX9g056983 | LOC_Os09g30300 | Os09g0480600 | - | Detail |
| C2H9g05733 | 9:15,486,760-15,487,356 | + | C1H9g03249 | CX9g056729 | LOC_Os09g30310 | Os09g0480700 | OsNF-YC7, HAP5E | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005975 | 1:4,399,253-4,400,499 | + | C1H1g27970 | C2H1g05843 | LOC_Os01g09730 | Os01g0193400 | - | Detail |
| CX1g003550 | 1:4,401,043-4,402,909 | - | C1H1g11468 | C2H1g21862 | LOC_Os01g09740 | Os01g0193500 | - | Detail |
| CX1g000614 | 1:4,404,573-4,408,077 | - | C1H1g10688 | C2H1g17174 | LOC_Os01g09750 | Os01g0193600 | - | Detail |
| CX1g006629 | 1:4,412,119-4,418,885 | + | C1H1g13152 | C2H1g04548 | LOC_Os01g09760 | Os01g0193900 | OsALYL1 | Detail |
| CX1g002400 | 1:4,419,653-4,422,938 | - | C1H1g06151 | C2H1g08327 | LOC_Os01g09770 | Os01g0194000 | - | Detail |
| CX1g002438 | 1:4,428,357-4,428,530 | + | - | - | - | - | - | Detail |
| CX1g001862 | 1:4,432,457-4,432,636 | + | - | - | - | - | - | Detail |
| CX1g002653 | 1:4,433,707-4,435,874 | - | C1H1g16281 | C2H1g05163 | LOC_Os01g09790 | Os01g0194200 | - | Detail |
| CX1g005297 | 1:4,437,032-4,437,187 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g000713 | 1:4,441,147-4,445,374 | - | C1H1g29130 | C2H1g20037 | LOC_Os01g09800 | Os01g0194300 | NH1, OsNH1, OsNPR1, OsNPR1/NH1, NPR1, OsPR2, PR2 | Detail |
| CX1g000442 | 1:4,458,075-4,458,455 | + | - | C2H1g05731 | LOC_Os01g09830 | Os01g0194600 | - | Detail |
| CX1g005498 | 1:4,468,383-4,470,021 | + | C1H1g00947 | C2H1g26832 | LOC_Os01g09850 | Os01g0195000 | OsIDD2 | Detail |
| CX1g000509 | 1:4,478,732-4,484,653 | - | C1H1g03034 | C2H1g03615 | LOC_Os01g09860 | Os01g0195200 | - | Detail |
| CX1g001794 | 1:4,496,357-4,496,833 | - | C1H1g10561 | C2H1g17887 | LOC_Os01g09870 | Os01g0195300 | - | Detail |
| CX1g003898 | 1:4,500,904-4,501,767 | - | C1H1g31641 | C2H1g30117 | LOC_Os01g09880 | Os01g0195400 | - | Detail |
| CX1g000703 | 1:4,508,201-4,510,301 | - | C1H1g28666 | C2H1g28884 | LOC_Os01g09890 | Os01g0195500 | - | Detail |
| CX1g000750 | 1:4,514,029-4,514,238 | - | - | - | - | - | - | Detail |
| CX1g006997 | 1:4,559,561-4,561,268 | + | C1H1g18771 | C2H1g19303 | LOC_Os01g09990 | Os01g0196300 | DPF, OsbHLH025 | Detail |
| CX1g000104 | 1:4,575,690-4,576,289 | - | - | C2H1g22870 | LOC_Os01g10010 | Os01g0196500 | - | Detail |
| CX1g005979 | 1:4,579,176-4,580,606 | + | C1H1g05499 | C2H1g12871 | LOC_Os01g10020 | Os01g0196600 | - | Detail |