| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g24442 | 8:1,326,354-1,332,457 | - | C1H8g25002 | CX8g051716 | LOC_Os08g03360 | Os08g0127300 | - | Detail |
| C2H8g12783 | 8:1,336,231-1,338,189 | + | C1H8g30739 | CX8g052727 | LOC_Os08g03370 | Os08g0127500 | - | Detail |
| C2H8g13939 | 8:1,338,910-1,342,853 | - | C1H8g29628 | CX8g054521 | LOC_Os08g03380 | Os08g0127600 | - | Detail |
| C2H8g02313 | 8:1,343,062-1,346,990 | + | C1H8g22690 | CX8g053032 | LOC_Os08g03390 | Os08g0127700 | - | Detail |
| C2H8g27149 | 8:1,356,077-1,357,891 | + | C1H8g06039 | CX8g050574 | LOC_Os08g03410 | Os08g0127900 | - | Detail |
| C2H8g29645 | 8:1,359,230-1,361,512 | + | C1H8g28965 | CX8g051419 | LOC_Os08g03420 | Os08g0128000 | - | Detail |
| C2H8g24700 | 8:1,365,451-1,368,158 | + | C1H8g09837 | CX8g053034 | LOC_Os08g03430 | Os08g0128200 | - | Detail |
| C2H8g15169 | 8:1,368,799-1,374,176 | - | C1H8g07007 | CX8g054820 | LOC_Os08g03440 | Os08g0128300 | - | Detail |
| C2H8g20609 | 8:1,378,037-1,379,983 | + | C1H8g19307 | CX8g053232 | LOC_Os08g03450 | Os08g0128500 | - | Detail |
| C2H8g21140 | 8:1,397,628-1,398,288 | - | C1H8g30765 | - | - | - | - | Detail |
| C2H8g16631 | 8:1,408,603-1,411,258 | + | C1H8g05958 | CX8g050956 | LOC_Os08g03510 | Os08g0227400 | - | Detail |
| C2H8g16695 | 8:1,411,636-1,412,223 | - | C1H8g24913 | - | LOC_Os08g03520 | Os08g0129200 | OsCSP2 | Detail |
| C2H8g02558 | 8:1,412,663-1,413,799 | + | C1H8g17599 | CX8g052221 | LOC_Os08g03530 | Os08g0129300 | - | Detail |
| C2H8g05130 | 8:1,415,581-1,418,807 | - | C1H8g14459 | - | LOC_Os08g03550 | Os08g0129500 | - | Detail |
| C2H8g01654 | 8:1,419,652-1,424,786 | - | C1H8g21199 | CX8g053799 | LOC_Os08g03560 | Os08g0129600 | - | Detail |
| C2H8g03184 | 8:1,433,528-1,438,614 | + | C1H8g09483 | CX8g053008 | LOC_Os08g03570 | Os08g0129700 | - | Detail |
| C2H8g07299 | 8:1,441,854-1,443,270 | + | C1H8g23118 | - | - | - | - | Detail |
| C2H8g27322 | 8:1,444,131-1,445,839 | + | C1H8g06838 | CX8g051782 | LOC_Os08g03590 | Os08g0129900 | - | Detail |
| C2H8g22694 | 8:1,447,575-1,450,372 | - | C1H8g18059 | CX8g054657 | LOC_Os08g03600 | Os08g0130000 | - | Detail |
| C2H8g10851 | 8:1,452,936-1,454,439 | - | C1H8g19751 | CX8g054160 | LOC_Os08g03610 | Os08g0130100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005975 | 1:4,399,253-4,400,499 | + | C1H1g27970 | C2H1g05843 | LOC_Os01g09730 | Os01g0193400 | - | Detail |
| CX1g003550 | 1:4,401,043-4,402,909 | - | C1H1g11468 | C2H1g21862 | LOC_Os01g09740 | Os01g0193500 | - | Detail |
| CX1g000614 | 1:4,404,573-4,408,077 | - | C1H1g10688 | C2H1g17174 | LOC_Os01g09750 | Os01g0193600 | - | Detail |
| CX1g006629 | 1:4,412,119-4,418,885 | + | C1H1g13152 | C2H1g04548 | LOC_Os01g09760 | Os01g0193900 | OsALYL1 | Detail |
| CX1g002400 | 1:4,419,653-4,422,938 | - | C1H1g06151 | C2H1g08327 | LOC_Os01g09770 | Os01g0194000 | - | Detail |
| CX1g002438 | 1:4,428,357-4,428,530 | + | - | - | - | - | - | Detail |
| CX1g001862 | 1:4,432,457-4,432,636 | + | - | - | - | - | - | Detail |
| CX1g002653 | 1:4,433,707-4,435,874 | - | C1H1g16281 | C2H1g05163 | LOC_Os01g09790 | Os01g0194200 | - | Detail |
| CX1g005297 | 1:4,437,032-4,437,187 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g000713 | 1:4,441,147-4,445,374 | - | C1H1g29130 | C2H1g20037 | LOC_Os01g09800 | Os01g0194300 | NH1, OsNH1, OsNPR1, OsNPR1/NH1, NPR1, OsPR2, PR2 | Detail |
| CX1g000442 | 1:4,458,075-4,458,455 | + | - | C2H1g05731 | LOC_Os01g09830 | Os01g0194600 | - | Detail |
| CX1g005498 | 1:4,468,383-4,470,021 | + | C1H1g00947 | C2H1g26832 | LOC_Os01g09850 | Os01g0195000 | OsIDD2 | Detail |
| CX1g000509 | 1:4,478,732-4,484,653 | - | C1H1g03034 | C2H1g03615 | LOC_Os01g09860 | Os01g0195200 | - | Detail |
| CX1g001794 | 1:4,496,357-4,496,833 | - | C1H1g10561 | C2H1g17887 | LOC_Os01g09870 | Os01g0195300 | - | Detail |
| CX1g003898 | 1:4,500,904-4,501,767 | - | C1H1g31641 | C2H1g30117 | LOC_Os01g09880 | Os01g0195400 | - | Detail |
| CX1g000703 | 1:4,508,201-4,510,301 | - | C1H1g28666 | C2H1g28884 | LOC_Os01g09890 | Os01g0195500 | - | Detail |
| CX1g000750 | 1:4,514,029-4,514,238 | - | - | - | - | - | - | Detail |
| CX1g006997 | 1:4,559,561-4,561,268 | + | C1H1g18771 | C2H1g19303 | LOC_Os01g09990 | Os01g0196300 | DPF, OsbHLH025 | Detail |
| CX1g000104 | 1:4,575,690-4,576,289 | - | - | C2H1g22870 | LOC_Os01g10010 | Os01g0196500 | - | Detail |
| CX1g005979 | 1:4,579,176-4,580,606 | + | C1H1g05499 | C2H1g12871 | LOC_Os01g10020 | Os01g0196600 | - | Detail |