| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g04890 | 9:19,069,124-19,073,047 | + | C2H9g17992 | CX9g056849 | LOC_Os09g39380 | Os09g0567300 | MDHAR, OsMDHAR, OsMDAR3, OsMDHAR3 | Detail |
| C1H9g13266 | 9:19,073,094-19,076,233 | + | C2H9g25680 | CX9g058049 | LOC_Os09g39390 | Os09g0567366 | - | Detail |
| C1H9g16090 | 9:19,078,531-19,081,006 | + | C2H9g00653 | CX9g056022 | LOC_Os09g39400 | Os09g0567400 | - | Detail |
| C1H9g25909 | 9:19,085,026-19,090,786 | + | C2H9g10548 | CX9g057497 | LOC_Os09g39410 | Os09g0567500 | - | Detail |
| C1H9g01897 | 9:19,091,906-19,096,902 | + | C2H9g15634 | CX9g055257 | LOC_Os09g39420 | Os09g0567700 | - | Detail |
| C1H9g27590 | 9:19,096,960-19,100,398 | - | C2H9g07527 | CX9g058075 | LOC_Os09g39430 | Os09g0567800 | - | Detail |
| C1H9g04610 | 9:19,103,896-19,106,558 | - | C2H9g28844 | CX9g058045 | LOC_Os09g39440 | Os09g0567900 | - | Detail |
| C1H9g06631 | 9:19,108,871-19,113,014 | + | C2H9g14034 | CX9g055030 | LOC_Os09g39462 | Os09g0568000 | - | Detail |
| C1H9g15019 | 9:19,113,667-19,113,891 | + | - | CX9g058185 | - | - | - | Detail |
| C1H9g18800 | 9:19,114,406-19,115,801 | + | C2H9g07303 | CX9g055723 | LOC_Os09g39474 | Os09g0568100 | - | Detail |
| C1H9g25533 | 9:19,116,932-19,117,909 | - | C2H9g14146 | CX9g055477 | LOC_Os09g39490 | Os09g0568200 | - | Detail |
| C1H9g00933 | 9:19,121,436-19,122,161 | - | - | CX9g056373 | LOC_Os09g39510 | Os09g0568500 | - | Detail |
| C1H9g05388 | 9:19,125,266-19,125,907 | - | - | CX9g056956 | LOC_Os09g39520 | Os09g0568600 | - | Detail |
| C1H9g08565 | 9:19,127,695-19,128,339 | - | - | CX9g057185 | LOC_Os09g39530 | Os09g0568700 | - | Detail |
| C1H9g27100 | 9:19,129,439-19,130,916 | - | C2H9g28333 | CX9g057377 | LOC_Os09g39540 | Os09g0568800 | - | Detail |
| C1H9g30656 | 9:19,131,188-19,133,085 | + | C2H9g03364 | CX9g055404 | LOC_Os09g39550 | Os09g0568900 | IF1-2, IF<sub>1</sub>-2 | Detail |
| C1H9g22287 | 9:19,134,907-19,136,848 | + | C2H9g03868 | CX9g057720 | LOC_Os09g39560 | Os09g0569100 | - | Detail |
| C1H9g23985 | 9:19,140,226-19,140,612 | + | C2H9g00291 | CX9g057873 | - | - | - | Detail |
| C1H9g14979 | 9:19,141,650-19,145,064 | + | C2H9g00291 | CX9g057873 | LOC_Os09g39570 | Os09g0569200 | - | Detail |
| C1H9g21337 | 9:19,145,011-19,148,481 | - | C2H9g21708 | CX9g056948 | LOC_Os09g39580 | Os09g0569300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g009122 | 10:12,590,037-12,591,337 | + | C1H10g19702 | C2H10g25009 | LOC_Os10g26500 | Os10g0404900 | - | Detail |
| CX10g007477 | 10:12,592,363-12,592,539 | + | - | - | - | - | - | Detail |
| CX10g010392 | 10:12,597,817-12,601,829 | + | C1H10g09426 | - | - | - | - | Detail |
| CX10g009203 | 10:12,608,010-12,612,801 | + | C1H10g31687 | C2H10g00267 | LOC_Os10g26520 | Os10g0405100 | - | Detail |
| CX10g010584 | 10:12,615,472-12,616,050 | + | C1H10g29879 | C2H10g29752 | LOC_Os10g26540 | Os10g0405300 | - | Detail |
| CX10g009344 | 10:12,625,255-12,630,668 | + | C1H10g05975 | C2H10g24843 | LOC_Os10g26560 | Os10g0405500 | PAIR3 | Detail |
| CX10g007362 | 10:12,631,470-12,634,616 | - | C1H10g05197 | C2H10g12168 | LOC_Os10g26570 | Os10g0405600 | - | Detail |
| CX10g010070 | 10:12,641,654-12,642,385 | + | - | C2H10g16975 | LOC_Os10g26590 | - | - | Detail |
| CX10g009510 | 10:12,646,170-12,647,572 | - | C1H10g16312 | C2H10g03758 | LOC_Os10g26600 | Os10g0406100 | - | Detail |
| CX10g009711 | 10:12,649,054-12,654,494 | - | C1H10g17493 | C2H10g05652 | LOC_Os10g26610 | Os10g0406200 | - | Detail |
| CX10g009972 | 10:12,654,866-12,657,974 | + | - | - | - | - | - | Detail |
| CX10g010215 | 10:12,663,474-12,665,650 | - | C1H10g19589 | C2H10g25059 | LOC_Os10g26620 | Os10g0406300 | - | Detail |
| CX10g009330 | 10:12,676,418-12,680,782 | - | C1H10g29567 | C2H10g20345 | LOC_Os10g26630 | Os10g0406400 | OsCSLA2 | Detail |
| CX10g008140 | 10:12,682,378-12,682,551 | + | - | - | - | - | - | Detail |
| CX10g010143 | 10:12,686,488-12,686,760 | - | C1H8g24242 | C2H10g26952 | LOC_Os10g26640 | Os10g0406600 | - | Detail |
| CX10g007690 | 10:12,695,759-12,701,145 | + | C1H10g02124 | C2H10g19012 | LOC_Os10g26660 | Os10g0406800 | - | Detail |
| CX10g010207 | 10:12,704,140-12,705,384 | + | C1H10g01809 | C2H10g18584 | LOC_Os10g26670 | Os10g0406900 | - | Detail |
| CX10g007536 | 10:12,708,878-12,711,039 | - | C1H10g23542 | C2H10g05384 | LOC_Os10g26680 | Os10g0407000 | - | Detail |
| CX10g008916 | 10:12,720,191-12,721,843 | - | C1H10g26570 | C2H10g20985 | LOC_Os10g26690 | Os10g0407100 | - | Detail |
| CX10g008008 | 10:12,722,564-12,723,433 | - | C1H10g18984 | C2H10g30234 | LOC_Os10g26700 | Os10g0407200 | - | Detail |