| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g27366 | 3:25,593,481-25,596,090 | + | C2H3g13044 | CX3g027834 | LOC_Os03g48010 | Os03g0684500 | - | Detail |
| C1H3g15233 | 3:25,596,794-25,598,680 | - | C2H3g22552 | CX3g025275 | LOC_Os03g48030 | Os03g0684700 | - | Detail |
| C1H3g05365 | 3:25,602,648-25,604,750 | + | C2H3g24042 | CX3g030044 | LOC_Os03g48040 | Os03g0685000 | OsFdC2, OsHDY1 | Detail |
| C1H3g13814 | 3:25,608,977-25,611,480 | + | C2H3g04933 | CX3g026303 | LOC_Os03g48050 | Os03g0685100 | - | Detail |
| C1H3g01967 | 3:25,628,711-25,631,971 | + | C2H3g27897 | CX3g027858 | LOC_Os03g48060 | Os03g0685300 | FLO19 | Detail |
| C1H3g16679 | 3:25,637,779-25,641,456 | - | C2H3g26335 | CX3g028901 | LOC_Os03g48080 | Os03g0685500 | - | Detail |
| C1H3g01229 | 3:25,641,900-25,645,954 | - | C2H3g24853 | CX3g029151 | LOC_Os03g48090 | Os03g0685600 | - | Detail |
| C1H3g02003 | 3:25,645,977-25,646,372 | - | C2H3g18835 | - | - | - | - | Detail |
| C1H3g30763 | 3:25,646,548-25,659,506 | + | C2H3g08146 | CX3g027759 | - | - | - | Detail |
| C1H3g16754 | 3:25,660,235-25,660,525 | + | - | - | LOC_Os03g48110 | Os03g0685900 | - | Detail |
| C1H3g31689 | 3:25,666,295-25,679,368 | - | C2H3g06193 | CX3g025545 | LOC_Os03g48140 | Os03g0686300 | - | Detail |
| C1H3g17077 | 3:25,685,933-25,689,140 | + | C2H3g15650 | CX3g025241 | LOC_Os03g48160 | Os03g0253100 | - | Detail |
| C1H3g31064 | 3:25,690,701-25,695,188 | + | C2H3g12008 | CX3g025276 | LOC_Os03g48170 | Os03g0686900 | FLO6 | Detail |
| C1H3g04074 | 3:25,695,859-25,701,417 | - | C2H3g19404 | CX3g025668 | LOC_Os03g51050 | Os03g0687000 | OsNPF2.4, NPF2.4, OsPTR2, PTR2 | Detail |
| C1H3g27780 | 3:25,713,193-25,717,194 | - | C2H3g17935 | CX3g029198 | LOC_Os03g48190 | Os03g0687200 | - | Detail |
| C1H3g31647 | 3:25,721,830-25,722,576 | - | C2H3g13078 | CX3g029222 | LOC_Os03g48220 | Os03g0687700 | - | Detail |
| C1H3g02479 | 3:25,724,849-25,725,295 | - | C2H3g02466 | CX3g025750 | LOC_Os03g48225 | Os03g0687800 | - | Detail |
| C1H3g12014 | 3:25,727,294-25,728,022 | - | C2H3g05793 | CX3g028579 | LOC_Os03g48235 | Os03g0688000 | - | Detail |
| C1H3g12256 | 3:25,730,050-25,730,676 | - | C2H3g06136 | CX3g029222 | LOC_Os03g48220 | Os03g0687700 | - | Detail |
| C1H3g24497 | 3:25,732,258-25,737,184 | + | C2H3g19874 | CX3g029090 | LOC_Os03g48260 | Os03g0688200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g009162 | 10:12,204,650-12,207,913 | - | C1H10g29310 | C2H10g07446 | LOC_Os10g25660 | Os10g0396100 | - | Detail |
| CX10g009659 | 10:12,212,224-12,213,743 | - | C1H10g05232 | C2H10g24522 | LOC_Os10g25674 | Os10g0396300 | - | Detail |
| CX10g007666 | 10:12,217,218-12,217,368 | + | - | - | - | - | - | Detail |
| CX10g009137 | 10:12,218,389-12,226,955 | - | C1H10g23576 | C2H10g17003 | LOC_Os10g25680 | Os10g0396400 | - | Detail |
| CX10g010597 | 10:12,229,657-12,229,860 | + | - | - | - | - | - | Detail |
| CX10g010258 | 10:12,241,940-12,242,534 | - | C1H10g11915 | C2H10g29107 | - | - | - | Detail |
| CX10g008319 | 10:12,245,920-12,248,651 | - | C1H10g21280 | C2H10g07060 | LOC_Os10g25770 | Os10g0397200 | - | Detail |
| CX10g010231 | 10:12,252,449-12,254,429 | - | C1H10g09327 | C2H10g21864 | LOC_Os10g25780 | Os10g0397400 | BRD2, LTBSG1, LHDD10 | Detail |
| CX10g008330 | 10:12,265,248-12,266,249 | + | - | C2H10g29265 | LOC_Os10g25810 | - | - | Detail |
| CX10g009964 | 10:12,275,059-12,276,210 | + | - | - | - | - | - | Detail |
| CX10g007423 | 10:12,282,689-12,283,238 | - | C1H10g18755 | C2H10g17630 | LOC_Os10g25870 | Os10g0398100 | - | Detail |
| CX10g009391 | 10:12,292,526-12,293,053 | - | C1H10g11467 | C2H10g19565 | LOC_Os10g25900 | Os10g0398100 | - | Detail |
| CX10g010303 | 10:12,306,641-12,312,449 | + | C1H10g22280 | C2H10g18601 | LOC_Os10g25930 | Os10g0399100 | - | Detail |
| CX10g009518 | 10:12,318,097-12,319,811 | - | C1H10g14564 | C2H10g14508 | LOC_Os10g25950 | Os10g0399200 | - | Detail |
| CX10g009929 | 10:12,321,017-12,321,244 | - | - | C2H10g22858 | - | - | - | Detail |
| CX10g008093 | 10:12,334,201-12,336,327 | + | C1H10g16699 | C2H10g05699 | LOC_Os10g26010 | Os10g0399700 | - | Detail |
| CX10g009163 | 10:12,343,816-12,347,379 | + | C1H10g15927 | C2H10g22042 | LOC_Os10g26050 | Os10g0400100 | - | Detail |
| CX10g009967 | 10:12,348,565-12,350,341 | - | C1H10g25661 | C2H10g01496 | LOC_Os10g26060 | Os10g0400200 | OsGluA2 | Detail |
| CX10g009826 | 10:12,351,266-12,354,761 | - | C1H10g11035 | C2H10g04973 | LOC_Os10g26070 | Os10g0400250 | - | Detail |
| CX10g008922 | 10:12,356,260-12,356,823 | + | - | - | - | - | - | Detail |