| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g19079 | 3:31,709,742-31,710,784 | - | C2H3g05006 | CX3g025408 | LOC_Os03g59720 | Os03g0811800 | - | Detail |
| C1H3g19228 | 3:31,745,476-31,759,310 | - | C2H3g19593 | CX3g028422 | - | Os03g0812000 | - | Detail |
| C1H3g24075 | 3:31,765,163-31,767,619 | + | C2H3g16505 | CX3g025855 | LOC_Os03g59760 | Os03g0812200 | - | Detail |
| C1H3g29140 | 3:31,782,306-31,782,722 | - | - | - | - | - | - | Detail |
| C1H3g23671 | 3:31,787,654-31,790,831 | - | C2H3g09561 | CX3g025448 | LOC_Os03g59840 | Os03g0813200 | - | Detail |
| C1H3g23594 | 3:31,805,054-31,806,130 | + | C2H3g11227 | CX3g030353 | LOC_Os03g60080 | Os03g0815100 | OsNAC19, SNAC1 | Detail |
| C1H3g00328 | 3:31,807,003-31,813,191 | - | C2H3g24873 | CX3g029581 | LOC_Os03g60090 | Os03g0815200 | - | Detail |
| C1H3g20553 | 3:31,814,250-31,814,633 | - | C2H3g26221 | - | - | Os03g0815332 | - | Detail |
| C1H3g20794 | 3:31,814,302-31,815,644 | + | C2H3g04086 | CX3g025237 | LOC_Os03g60100 | Os03g0815400 | - | Detail |
| C1H3g22427 | 3:31,822,439-31,826,090 | + | C2H3g14885 | CX3g029363 | LOC_Os03g60110 | Os03g0815700 | Spin1, SPIN1 | Detail |
| C1H3g09437 | 3:31,828,607-31,829,353 | - | C2H3g05216 | CX3g030003 | LOC_Os03g60120 | Os03g0815800 | - | Detail |
| C1H3g16381 | 3:31,831,314-31,834,037 | - | C2H3g17896 | CX3g030342 | LOC_Os03g60130 | Os03g0815900 | - | Detail |
| C1H3g12909 | 3:31,837,074-31,838,284 | - | C2H3g03956 | CX3g025316 | LOC_Os03g60140 | Os03g0816000 | - | Detail |
| C1H3g09858 | 3:31,838,927-31,842,804 | - | C2H3g08821 | CX3g030622 | LOC_Os03g60150 | Os03g0816100 | - | Detail |
| C1H3g10675 | 3:31,849,495-31,851,106 | + | C2H3g29247 | - | - | Os03g0816200 | - | Detail |
| C1H3g28154 | 3:31,854,366-31,859,983 | - | C2H3g28963 | CX3g027879 | LOC_Os03g60170 | Os03g0816300 | - | Detail |
| C1H3g21278 | 3:31,861,583-31,866,220 | - | C2H3g10484 | CX3g027734 | LOC_Os03g60180 | Os03g0816400 | - | Detail |
| C1H3g16235 | 3:31,869,959-31,875,204 | + | C2H3g29652 | CX3g029573 | LOC_Os03g60200 | Os03g0816600 | - | Detail |
| C1H3g01566 | 3:31,876,781-31,877,895 | - | C2H3g04502 | CX3g031210 | LOC_Os03g60210 | Os03g0816700 | - | Detail |
| C1H3g01354 | 3:31,879,282-31,880,081 | - | C2H3g09881 | CX3g029902 | LOC_Os03g60220 | Os03g0816800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g010496 | 10:11,806,333-11,808,501 | - | C1H10g16501 | C2H10g15642 | LOC_Os10g25000 | Os10g0388900 | - | Detail |
| CX10g009328 | 10:11,809,755-11,813,031 | - | C1H10g20399 | C2H10g22164 | LOC_Os10g25010 | Os10g0389000 | - | Detail |
| CX10g008287 | 10:11,829,006-11,830,651 | - | C1H10g31217 | C2H10g08118 | LOC_Os10g25030 | Os10g0389200 | OsRCCR1, RCCR1 | Detail |
| CX10g009111 | 10:11,833,929-11,835,813 | - | C1H10g29678 | C2H10g06911 | LOC_Os10g25040 | Os10g0389300 | OsRCCR2, RCCR2 | Detail |
| CX10g010034 | 10:11,838,932-11,841,061 | - | C1H10g05335 | C2H10g10371 | LOC_Os10g25060 | Os10g0389500 | - | Detail |
| CX10g010434 | 10:11,850,825-11,855,735 | - | C1H10g25222 | C2H10g02601 | LOC_Os10g25090 | Os10g0389800 | - | Detail |
| CX10g010038 | 10:11,865,855-11,866,533 | - | C1H10g17161 | C2H10g04454 | LOC_Os10g25100 | Os10g0390000 | - | Detail |
| CX10g009005 | 10:11,867,975-11,868,127 | - | - | - | - | - | - | Detail |
| CX10g010064 | 10:11,868,618-11,874,460 | - | C1H10g21265 | C2H10g08896 | LOC_Os10g25110 | Os10g0390100 | - | Detail |
| CX10g007919 | 10:11,878,893-11,879,234 | + | - | - | - | - | - | Detail |
| CX10g010526 | 10:11,885,877-11,891,590 | + | C1H10g19918 | C2H10g25470 | LOC_Os10g25130 | Os10g0390500 | ALAAT, alaAT, ALT-1, OsAlaAT1, AlaAT1 | Detail |
| CX10g007360 | 10:11,895,347-11,899,665 | + | C1H10g03129 | C2H10g20842 | LOC_Os10g25140 | Os10g0390600 | - | Detail |
| CX10g008314 | 10:11,900,297-11,900,792 | + | C1H10g18016 | C2H10g18753 | LOC_Os10g25150 | Os10g0390701 | - | Detail |
| CX10g009554 | 10:11,907,628-11,908,708 | + | C1H10g31052 | C2H10g26134 | LOC_Os10g25170 | Os10g0390800 | - | Detail |
| CX10g009276 | 10:11,910,763-11,911,008 | + | - | - | - | - | - | Detail |
| CX10g008890 | 10:11,919,446-11,921,468 | - | C1H10g11552 | C2H10g15320 | LOC_Os10g25180 | Os10g0390900 | - | Detail |
| CX10g010213 | 10:11,927,597-11,936,655 | + | C1H10g07468 | C2H10g13856 | LOC_Os10g25200 | Os10g0391100 | - | Detail |
| CX10g009788 | 10:11,939,136-11,940,623 | - | C1H10g23386 | C2H10g24210 | LOC_Os10g25210 | Os10g0391200 | - | Detail |
| CX10g007514 | 10:11,941,725-11,946,041 | - | C1H10g24597 | C2H10g25871 | LOC_Os10g25220 | Os10g0391300 | - | Detail |
| CX10g008699 | 10:11,947,266-11,947,502 | - | - | - | - | - | - | Detail |