| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g00213 | 9:3,599,614-3,612,477 | - | C2H9g30619 | CX9g056929 | LOC_Os09g07670 | Os09g0250800 | - | Detail |
| C1H9g12000 | 9:3,632,374-3,634,012 | + | C2H9g15415 | - | LOC_Os09g07780 | Os09g0251450 | - | Detail |
| C1H9g31511 | 9:3,653,452-3,655,410 | + | C2H9g06665 | CX9g057361 | LOC_Os09g07730 | Os09g0251100 | - | Detail |
| C1H9g27075 | 9:3,657,872-3,658,318 | + | C2H9g25970 | - | LOC_Os01g46910 | Os01g0658300 | - | Detail |
| C1H9g20803 | 9:3,665,646-3,668,545 | + | C2H9g10088 | CX9g056095 | LOC_Os09g07800 | Os09g0251800 | - | Detail |
| C1H9g11596 | 9:3,675,254-3,678,338 | + | C2H9g03841 | CX9g056028 | LOC_Os09g07820 | Os09g0252000 | - | Detail |
| C1H9g25197 | 9:3,692,890-3,698,372 | + | C2H9g18120 | CX9g057349 | LOC_Os09g07830 | Os09g0252100 | - | Detail |
| C1H9g01757 | 9:3,706,969-3,709,235 | + | C2H9g17789 | CX9g056942 | - | - | - | Detail |
| C1H9g01122 | 9:3,720,934-3,740,322 | + | C2H9g02510 | CX9g056025 | LOC_Os09g07900 | Os09g0252800 | - | Detail |
| C1H9g06245 | 9:3,746,472-3,748,905 | + | C2H9g27366 | - | LOC_Os09g07920 | Os09g0253000 | - | Detail |
| C1H9g08288 | 9:3,764,759-3,767,606 | - | C2H9g19417 | CX9g057312 | LOC_Os09g07990 | Os09g0535200 | - | Detail |
| C1H9g10685 | 9:3,786,315-3,788,841 | - | C2H9g25594 | CX9g057312 | LOC_Os09g07940 | Os09g0535200 | - | Detail |
| C1H9g14679 | 9:3,808,254-3,813,732 | + | C2H9g07409 | CX9g057173 | LOC_Os09g08072 | Os09g0255000 | - | Detail |
| C1H9g08895 | 9:3,824,013-3,824,783 | + | C2H9g01652 | CX9g057173 | LOC_Os09g08072 | Os09g0255300 | - | Detail |
| C1H9g16230 | 9:3,844,366-3,847,474 | - | C2H9g05685 | CX9g056657 | LOC_Os09g08130 | Os09g0255400 | - | Detail |
| C1H9g01132 | 9:3,878,015-3,880,761 | + | C2H9g04238 | - | - | - | - | Detail |
| C1H9g30569 | 9:3,887,914-3,891,030 | - | - | CX9g056239 | - | - | - | Detail |
| C1H9g08547 | 9:4,024,352-4,029,923 | - | C2H9g08292 | CX9g055604 | LOC_Os09g08390 | Os09g0258000 | - | Detail |
| C1H9g28379 | 9:4,067,274-4,070,862 | - | C2H9g11852 | CX9g055819 | LOC_Os09g08420 | Os09g0258500 | OsAGC16 | Detail |
| C1H9g08162 | 9:4,073,477-4,074,180 | - | C2H9g03970 | CX9g057750 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX10g010496 | 10:11,806,333-11,808,501 | - | C1H10g16501 | C2H10g15642 | LOC_Os10g25000 | Os10g0388900 | - | Detail |
| CX10g009328 | 10:11,809,755-11,813,031 | - | C1H10g20399 | C2H10g22164 | LOC_Os10g25010 | Os10g0389000 | - | Detail |
| CX10g008287 | 10:11,829,006-11,830,651 | - | C1H10g31217 | C2H10g08118 | LOC_Os10g25030 | Os10g0389200 | OsRCCR1, RCCR1 | Detail |
| CX10g009111 | 10:11,833,929-11,835,813 | - | C1H10g29678 | C2H10g06911 | LOC_Os10g25040 | Os10g0389300 | OsRCCR2, RCCR2 | Detail |
| CX10g010034 | 10:11,838,932-11,841,061 | - | C1H10g05335 | C2H10g10371 | LOC_Os10g25060 | Os10g0389500 | - | Detail |
| CX10g010434 | 10:11,850,825-11,855,735 | - | C1H10g25222 | C2H10g02601 | LOC_Os10g25090 | Os10g0389800 | - | Detail |
| CX10g010038 | 10:11,865,855-11,866,533 | - | C1H10g17161 | C2H10g04454 | LOC_Os10g25100 | Os10g0390000 | - | Detail |
| CX10g009005 | 10:11,867,975-11,868,127 | - | - | - | - | - | - | Detail |
| CX10g010064 | 10:11,868,618-11,874,460 | - | C1H10g21265 | C2H10g08896 | LOC_Os10g25110 | Os10g0390100 | - | Detail |
| CX10g007919 | 10:11,878,893-11,879,234 | + | - | - | - | - | - | Detail |
| CX10g010526 | 10:11,885,877-11,891,590 | + | C1H10g19918 | C2H10g25470 | LOC_Os10g25130 | Os10g0390500 | ALAAT, alaAT, ALT-1, OsAlaAT1, AlaAT1 | Detail |
| CX10g007360 | 10:11,895,347-11,899,665 | + | C1H10g03129 | C2H10g20842 | LOC_Os10g25140 | Os10g0390600 | - | Detail |
| CX10g008314 | 10:11,900,297-11,900,792 | + | C1H10g18016 | C2H10g18753 | LOC_Os10g25150 | Os10g0390701 | - | Detail |
| CX10g009554 | 10:11,907,628-11,908,708 | + | C1H10g31052 | C2H10g26134 | LOC_Os10g25170 | Os10g0390800 | - | Detail |
| CX10g009276 | 10:11,910,763-11,911,008 | + | - | - | - | - | - | Detail |
| CX10g008890 | 10:11,919,446-11,921,468 | - | C1H10g11552 | C2H10g15320 | LOC_Os10g25180 | Os10g0390900 | - | Detail |
| CX10g010213 | 10:11,927,597-11,936,655 | + | C1H10g07468 | C2H10g13856 | LOC_Os10g25200 | Os10g0391100 | - | Detail |
| CX10g009788 | 10:11,939,136-11,940,623 | - | C1H10g23386 | C2H10g24210 | LOC_Os10g25210 | Os10g0391200 | - | Detail |
| CX10g007514 | 10:11,941,725-11,946,041 | - | C1H10g24597 | C2H10g25871 | LOC_Os10g25220 | Os10g0391300 | - | Detail |
| CX10g008699 | 10:11,947,266-11,947,502 | - | - | - | - | - | - | Detail |